Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 AL078621.3-201ENST00000623707 2042 ntBASIC9.12□□□□□ -0.95
TOPBP1Q92547 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOPBP1Q92547 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
TOPBP1Q92547 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 DBIP1-201ENST00000401435 260 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 AC116036.1-201ENST00000412199 367 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 AL356981.1-201ENST00000454879 684 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 RN7SL481P-201ENST00000477764 299 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 ATP5J2P6-201ENST00000565203 266 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 AC005341.1-201ENST00000571086 708 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC9.11□□□□□ -0.95
TOPBP1Q92547 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOPBP1Q92547 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.11□□□□□ -0.95
TOPBP1Q92547 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 COX6CP17-201ENST00000421389 185 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 AC078899.1-201ENST00000521432 1185 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 MIR4270-201ENST00000581799 70 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 AP000769.2-201ENST00000602344 396 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 AP003789.1-201ENST00000617737 605 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 AC079741.1-201ENST00000321498 212 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 MEMO1P4-201ENST00000453590 386 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 AC008033.2-201ENST00000542626 177 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 EDDM3DP-201ENST00000554692 434 ntBASIC9.1□□□□□ -0.95
TOPBP1Q92547 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TOPBP1Q92547 NAA60-237ENST00000615865 326 ntTSL 5 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TOPBP1Q92547 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 U3.3-201ENST00000362986 216 ntBASIC9.09□□□□□ -0.95
TOPBP1Q92547 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 YWHABP2-201ENST00000540201 713 ntBASIC9.09□□□□□ -0.95
TOPBP1Q92547 MIR6780A-201ENST00000615089 68 ntBASIC9.09□□□□□ -0.95
TOPBP1Q92547 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC9.09□□□□□ -0.95
TOPBP1Q92547 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TOPBP1Q92547 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 AC112243.1-201ENST00000623949 3851 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TOPBP1Q92547 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TOPBP1Q92547 AC013268.3-201ENST00000262716 2324 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TOPBP1Q92547 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TOPBP1Q92547 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TOPBP1Q92547 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 RPL34P20-201ENST00000442771 351 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 RPL36AP15-201ENST00000444514 266 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 AL445687.2-201ENST00000458156 728 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 GTF2F2P1-201ENST00000511083 675 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 BTF3P13-201ENST00000513224 490 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 UBE2FP2-201ENST00000566646 462 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms