Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL078599.1-201ENST00000402075 293 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AL354868.1-201ENST00000417077 482 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 OR5M12P-201ENST00000423388 929 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 PPP1R11P1-201ENST00000486095 376 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 USP9YP3-201ENST00000434481 1766 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 COX6CP17-201ENST00000421389 185 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC073072.2-201ENST00000447425 348 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 TRY2P-201ENST00000448860 689 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AL008638.3-201ENST00000623027 5182 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC006213.6-201ENST00000623722 4179 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC068769.1-201ENST00000474767 2426 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 NLRP3P1-201ENST00000622303 1785 ntBASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 RN7SKP151-201ENST00000410230 316 ntBASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 AC007346.2-201ENST00000564816 892 ntBASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 AC137695.1-201ENST00000604126 489 ntBASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC3.71□□□□□ -1.81
ALMS1Q8TCU4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 PARP4P1-201ENST00000435945 2337 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 ZNF733P-202ENST00000444809 1573 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 GLULP6-201ENST00000399502 913 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 RN7SKP27-201ENST00000410684 333 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AC139697.1-201ENST00000548429 745 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 SNORA62-201ENST00000365493 153 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 RNU6-398P-201ENST00000384143 109 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AC092570.3-201ENST00000420113 693 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 RPS27AP6-201ENST00000427962 448 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 OR11I1P-201ENST00000486033 954 ntBASIC3.71□□□□□ -1.82
ALMS1Q8TCU4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms