Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC112255.1-201ENST00000624070 2493 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 OR1F12-201ENST00000402365 945 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 RN7SKP59-201ENST00000410520 314 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 GABARAPL3-201ENST00000412799 354 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AL596448.1-201ENST00000415024 392 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC097721.1-201ENST00000427150 1253 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 ARL5AP3-201ENST00000439327 386 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AL606490.8-201ENST00000441624 319 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 SNORA43.3-201ENST00000517240 103 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 OR4V1P-201ENST00000525394 1140 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC012414.2-201ENST00000559474 187 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC024255.1-201ENST00000614376 102 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 AC073592.7-201ENST00000623659 507 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 SAMMSON-227ENST00000642114 1199 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 OR10AB1P-202ENST00000641219 1686 ntBASIC6.48□□□□□ -1.37
HERC6Q8IVU3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 PARP4P2-201ENST00000446672 3326 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 RNU11-6P-201ENST00000391127 133 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AL356968.2-201ENST00000412769 1257 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 RN7SL727P-201ENST00000482164 296 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC006499.3-201ENST00000506077 748 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC007204.2-201ENST00000615022 616 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 MIR7155-201ENST00000615925 56 ntBASIC6.47□□□□□ -1.37
HERC6Q8IVU3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HERC6Q8IVU3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HERC6Q8IVU3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.46□□□□□ -1.37
HERC6Q8IVU3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.46□□□□□ -1.37
HERC6Q8IVU3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
HERC6Q8IVU3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.46□□□□□ -1.37
HERC6Q8IVU3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 RNA5SP514-201ENST00000363717 111 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 SNORA70H-201ENST00000383910 135 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 SNORA70J-201ENST00000384182 135 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AP003170.5-201ENST00000397185 335 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 NACAP7-201ENST00000407371 609 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC017099.1-201ENST00000448261 1028 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AL606490.1-201ENST00000452266 765 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms