Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 GAPDHP24-201ENST00000328713 983 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC009804.1-201ENST00000400949 179 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 NANOGP4-201ENST00000427230 913 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 RPL7L1P9-201ENST00000431298 745 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC096775.1-201ENST00000437724 448 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 EIF1P7-201ENST00000487533 337 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC093763.2-201ENST00000505334 1223 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 IGLV2-28-201ENST00000520681 304 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC078899.1-201ENST00000521432 1185 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC044860.2-201ENST00000561005 179 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC007346.2-201ENST00000564816 892 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 CASC19-264ENST00000641912 1184 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 AC123769.1-201ENST00000530992 3192 ntBASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM1Q2M3G4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AL162456.1-201ENST00000634535 2006 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC005042.1-201ENST00000393397 800 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 MIR1286-201ENST00000408112 78 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 RN7SKP273-201ENST00000411392 314 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AL627308.1-201ENST00000435693 821 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 OR6D1P-201ENST00000436165 939 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 CNOT7P2-201ENST00000441051 832 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC245047.2-201ENST00000441060 530 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AL035090.1-201ENST00000454835 332 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC026348.1-201ENST00000462549 1053 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 NDUFA5P12-201ENST00000503796 343 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 HIGD1AP14-201ENST00000507617 282 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 RNU6-1334P-201ENST00000516032 105 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AP003080.1-202ENST00000526526 915 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 BNIP3P32-201ENST00000600015 554 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC000068.2-201ENST00000608816 460 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC004948.1-201ENST00000609858 672 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC025574.2-201ENST00000615621 514 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 AC083837.1-201ENST00000565297 2994 ntBASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM1Q2M3G4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 HSPD1P8-201ENST00000400121 1658 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 SAMMSON-210ENST00000641260 1308 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 RNA5SP183-201ENST00000362452 119 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms