Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 RPL26P37-201ENST00000411983 438 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AC245096.1-201ENST00000413104 546 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN1BQ07699 RSL24D1P8-201ENST00000434442 492 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 GAPDHP37-201ENST00000442317 968 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SCN1BQ07699 RANP2-201ENST00000456833 229 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AC021205.1-201ENST00000468797 348 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 AC018639.1-201ENST00000492994 442 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 OR7E157P-201ENST00000494376 911 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 RPSAP51-201ENST00000497462 645 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 OR7E99P-201ENST00000505750 922 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN1BQ07699 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 AC092865.1-201ENST00000544395 1023 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.3□□□□□ -1.56
SCN1BQ07699 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.3□□□□□ -1.56
SCN1BQ07699 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 RN7SL66P-201ENST00000582099 264 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 RN7SL475P-201ENST00000583379 298 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 MIR212-201ENST00000586026 110 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AP004372.1-201ENST00000604842 844 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN1BQ07699 AC004808.2-201ENST00000627965 773 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN1BQ07699 AC016583.1-201ENST00000624221 2431 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 AC024587.1-201ENST00000505925 2157 ntBASIC5.3□□□□□ -1.56
SCN1BQ07699 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SCN1BQ07699 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN1BQ07699 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SCN1BQ07699 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN1BQ07699 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN1BQ07699 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AC015689.2-201ENST00000528172 1738 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 RN7SKP145-201ENST00000363291 303 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN1BQ07699 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AC003045.1-201ENST00000398779 713 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 NMD3P2-201ENST00000421815 761 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 CYCSP11-201ENST00000436426 315 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 WDR82P2-201ENST00000444540 928 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 COX4I1P2-201ENST00000447446 547 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 RPL23AP60-201ENST00000450011 454 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AC022431.1-201ENST00000450941 438 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AL513343.1-201ENST00000451818 792 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 CBX1P2-201ENST00000453841 458 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 PSMC1P13-201ENST00000458195 985 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 RN7SL83P-201ENST00000468131 297 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN1BQ07699 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 RNA5SP230-201ENST00000517039 122 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.29□□□□□ -1.56
SCN1BQ07699 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AL133399.1-201ENST00000527476 298 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.29□□□□□ -1.56
SCN1BQ07699 HMGN1P26-201ENST00000558737 303 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AC090826.1-203ENST00000569235 490 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AL133247.2-201ENST00000603236 482 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AL353729.2-201ENST00000605859 1249 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 AL133481.2-203ENST00000607558 139 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.29□□□□□ -1.56
SCN1BQ07699 AC022400.9-201ENST00000623633 273 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN1BQ07699 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN1BQ07699 KARSP1-201ENST00000451871 1752 ntBASIC5.29□□□□□ -1.56
SCN1BQ07699 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
SCN1BQ07699 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN1BQ07699 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms