Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LTBQ06643 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 RNU6-819P-201ENST00000364116 107 ntBASIC5.5□□□□□ -1.53
LTBQ06643 ATP5F1P6-201ENST00000402768 767 ntBASIC5.5□□□□□ -1.53
LTBQ06643 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.5□□□□□ -1.53
LTBQ06643 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 MTND4LP7-201ENST00000431728 294 ntBASIC5.5□□□□□ -1.53
LTBQ06643 MTCO1P57-201ENST00000432182 261 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AL731534.1-201ENST00000434711 269 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 AL606517.1-201ENST00000446914 387 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.5□□□□□ -1.53
LTBQ06643 RPL23AP60-201ENST00000450011 454 ntBASIC5.5□□□□□ -1.53
LTBQ06643 RAB28P2-201ENST00000454299 641 ntBASIC5.5□□□□□ -1.53
LTBQ06643 RN7SL610P-201ENST00000463845 291 ntBASIC5.5□□□□□ -1.53
LTBQ06643 RPS26P39-201ENST00000469206 341 ntBASIC5.5□□□□□ -1.53
LTBQ06643 SEPT7P6-201ENST00000469999 1143 ntBASIC5.5□□□□□ -1.53
LTBQ06643 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 AC025458.1-201ENST00000506046 166 ntBASIC5.5□□□□□ -1.53
LTBQ06643 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.5□□□□□ -1.53
LTBQ06643 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AC090958.1-201ENST00000511122 351 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.5□□□□□ -1.53
LTBQ06643 AP001372.4-201ENST00000524889 472 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AC134349.2-201ENST00000535136 910 ntBASIC5.5□□□□□ -1.53
LTBQ06643 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.5□□□□□ -1.53
LTBQ06643 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.5□□□□□ -1.53
LTBQ06643 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LTBQ06643 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.5□□□□□ -1.53
LTBQ06643 AP005136.2-201ENST00000583253 1049 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AP001267.4-201ENST00000602598 545 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AC009948.4-201ENST00000604692 675 ntBASIC5.5□□□□□ -1.53
LTBQ06643 PPATP2-201ENST00000605635 508 ntBASIC5.5□□□□□ -1.53
LTBQ06643 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
LTBQ06643 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.5□□□□□ -1.53
LTBQ06643 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.5□□□□□ -1.53
LTBQ06643 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.5□□□□□ -1.53
LTBQ06643 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.5□□□□□ -1.53
LTBQ06643 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.5□□□□□ -1.53
LTBQ06643 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LTBQ06643 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LTBQ06643 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LTBQ06643 CCAT2-201ENST00000630920 1752 ntBASIC5.5□□□□□ -1.53
LTBQ06643 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LTBQ06643 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LTBQ06643 AL049634.1-201ENST00000453770 1720 ntBASIC5.49□□□□□ -1.53
LTBQ06643 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.49□□□□□ -1.53
LTBQ06643 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.49□□□□□ -1.53
LTBQ06643 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.49□□□□□ -1.53
LTBQ06643 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.49□□□□□ -1.53
LTBQ06643 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
LTBQ06643 SNORA74A-201ENST00000364089 198 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RNU105B-201ENST00000364478 208 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AL096829.1-201ENST00000413677 457 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RPS15AP30-201ENST00000420976 390 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.49□□□□□ -1.53
LTBQ06643 NIPA2P1-201ENST00000426223 976 ntBASIC5.49□□□□□ -1.53
LTBQ06643 CDY8P-201ENST00000428380 1279 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.49□□□□□ -1.53
LTBQ06643 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.49□□□□□ -1.53
LTBQ06643 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.49□□□□□ -1.53
LTBQ06643 ZNF619P1-201ENST00000446539 752 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC097463.1-201ENST00000447288 481 ntBASIC5.49□□□□□ -1.53
LTBQ06643 CDY20P-201ENST00000447528 1279 ntBASIC5.49□□□□□ -1.53
LTBQ06643 snoU13.29-201ENST00000459370 104 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RN7SL352P-201ENST00000466002 277 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RN7SL717P-201ENST00000478343 297 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC093827.1-201ENST00000480094 861 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RN7SL273P-201ENST00000481561 299 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC092902.1-201ENST00000486999 259 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.49□□□□□ -1.53
LTBQ06643 AC016550.1-201ENST00000505348 785 ntBASIC5.49□□□□□ -1.53
LTBQ06643 SNORA70.17-201ENST00000516449 133 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RNU6-964P-201ENST00000516524 69 ntBASIC5.49□□□□□ -1.53
LTBQ06643 RN7SKP35-201ENST00000517210 151 ntBASIC5.49□□□□□ -1.53
LTBQ06643 IGKV2-19-201ENST00000518132 283 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC060775.1-201ENST00000518241 520 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.49□□□□□ -1.53
LTBQ06643 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.49□□□□□ -1.53
LTBQ06643 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LTBQ06643 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.49□□□□□ -1.53
LTBQ06643 AL121594.4-201ENST00000556211 1196 ntBASIC5.49□□□□□ -1.53
LTBQ06643 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.49□□□□□ -1.53
LTBQ06643 MIR4701-201ENST00000583094 63 ntBASIC5.49□□□□□ -1.53
LTBQ06643 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.49□□□□□ -1.53
LTBQ06643 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms