Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CACNA1BQ00975 RNA5SP131-201ENST00000365452 119 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 AL353625.1-202ENST00000366273 571 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 RNU1-46P-201ENST00000384425 164 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CACNA1BQ00975 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CACNA1BQ00975 RPL23AP68-201ENST00000480924 445 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 AC090638.1-201ENST00000498296 909 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 IGHV3-57-201ENST00000520143 280 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 MRPS16P1-201ENST00000523462 412 ntBASIC5.41□□□□□ -1.54
CACNA1BQ00975 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.41□□□□□ -1.54
CACNA1BQ00975 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CACNA1BQ00975 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC5.41□□□□□ -1.54
CACNA1BQ00975 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.41□□□□□ -1.54
CACNA1BQ00975 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.41□□□□□ -1.54
CACNA1BQ00975 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CACNA1BQ00975 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CACNA1BQ00975 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CACNA1BQ00975 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CACNA1BQ00975 RNA5SP319-201ENST00000362768 119 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CACNA1BQ00975 NMD3P2-201ENST00000421815 761 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC008072.1-201ENST00000434254 824 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC026826.1-201ENST00000493002 361 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC008147.3-201ENST00000548666 354 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC127381.1-201ENST00000555979 939 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 RBM22P1-201ENST00000578589 1214 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 GTF2IP6-201ENST00000583143 541 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC006130.2-201ENST00000586202 326 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC010463.3-201ENST00000594077 500 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 AC093799.2-201ENST00000610062 578 ntBASIC5.4□□□□□ -1.54
CACNA1BQ00975 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CACNA1BQ00975 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CACNA1BQ00975 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CACNA1BQ00975 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CACNA1BQ00975 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CACNA1BQ00975 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CACNA1BQ00975 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 RNU1-64P-201ENST00000365443 163 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 RNA5SP339-201ENST00000390987 122 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 SAP18P1-201ENST00000512058 390 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AC138701.1-201ENST00000524329 714 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AL109766.1-201ENST00000555080 552 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AL132640.3-201ENST00000630473 177 ntBASIC5.4□□□□□ -1.55
CACNA1BQ00975 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CACNA1BQ00975 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CACNA1BQ00975 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 MAPK10-287ENST00000641217 3037 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 GTF2IP4-201ENST00000453092 2054 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 PPATP2-201ENST00000605635 508 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 AC017104.4-201ENST00000636283 1592 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 288.5 ms