Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP003396.4-201ENST00000527574 265 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
TPM4P67936 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 LSM3P2-201ENST00000551246 273 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM4P67936 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 MT1CP-201ENST00000567054 174 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AL078601.3-201ENST00000573303 535 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 RN7SL230P-201ENST00000580835 303 ntBASIC6.25□□□□□ -1.41
TPM4P67936 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 MIR6883-201ENST00000614952 78 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AC245014.3-201ENST00000618589 347 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AL136228.1-201ENST00000622221 319 ntBASIC6.25□□□□□ -1.41
TPM4P67936 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM4P67936 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM4P67936 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 PSG10P-201ENST00000501199 1500 ntBASIC6.25□□□□□ -1.41
TPM4P67936 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM4P67936 AC144833.1-201ENST00000567953 4089 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AC068870.1-201ENST00000563737 2455 ntBASIC6.24□□□□□ -1.41
TPM4P67936 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.24□□□□□ -1.41
TPM4P67936 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TPM4P67936 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.24□□□□□ -1.41
TPM4P67936 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 RNA5SP241-201ENST00000391326 114 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AL035422.1-201ENST00000414193 397 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TPM4P67936 AC007679.3-201ENST00000434035 414 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.24□□□□□ -1.41
TPM4P67936 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 AC093166.4-201ENST00000457867 318 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AP000797.2-201ENST00000475768 606 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.24□□□□□ -1.41
TPM4P67936 RNA5SP441-201ENST00000516809 88 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 AC068993.1-201ENST00000546724 589 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.24□□□□□ -1.41
TPM4P67936 AC004232.2-201ENST00000574245 821 ntBASIC6.24□□□□□ -1.41
TPM4P67936 MIR4311-201ENST00000580794 100 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM4P67936 AC004801.6-201ENST00000616571 978 ntBASIC6.24□□□□□ -1.41
TPM4P67936 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.24□□□□□ -1.41
TPM4P67936 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM4P67936 AC027088.4-201ENST00000611559 1947 ntBASIC6.24□□□□□ -1.41
TPM4P67936 AC006206.1-201ENST00000544842 3387 ntBASIC6.24□□□□□ -1.41
TPM4P67936 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TPM4P67936 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM4P67936 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM4P67936 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 PDZK1P1-202ENST00000425209 1350 ntBASIC6.23□□□□□ -1.41
TPM4P67936 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.23□□□□□ -1.41
TPM4P67936 RN7SKP146-201ENST00000410242 334 ntBASIC6.23□□□□□ -1.41
TPM4P67936 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.23□□□□□ -1.41
TPM4P67936 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.23□□□□□ -1.41
TPM4P67936 RPL6P30-201ENST00000443382 862 ntBASIC6.23□□□□□ -1.41
TPM4P67936 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM4P67936 OR52I1-201ENST00000450052 1050 ntBASIC6.23□□□□□ -1.41
TPM4P67936 AC004890.1-201ENST00000461005 181 ntBASIC6.23□□□□□ -1.41
TPM4P67936 RN7SL362P-201ENST00000494228 267 ntBASIC6.23□□□□□ -1.41
TPM4P67936 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.23□□□□□ -1.41
TPM4P67936 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM4P67936 AC098976.1-201ENST00000513014 541 ntBASIC6.23□□□□□ -1.41
TPM4P67936 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM4P67936 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM4P67936 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM4P67936 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.23□□□□□ -1.41
TPM4P67936 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM4P67936 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.23□□□□□ -1.41
TPM4P67936 RPA2P1-201ENST00000556557 721 ntBASIC6.23□□□□□ -1.41
TPM4P67936 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM4P67936 HMGN1P26-201ENST00000558737 303 ntBASIC6.23□□□□□ -1.41
TPM4P67936 RN7SL290P-201ENST00000578661 300 ntBASIC6.23□□□□□ -1.41
TPM4P67936 MIR4433B-201ENST00000581329 102 ntBASIC6.23□□□□□ -1.41
TPM4P67936 AC090236.2-201ENST00000587933 1101 ntBASIC6.23□□□□□ -1.41
TPM4P67936 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM4P67936 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM4P67936 AC026367.3-201ENST00000619032 590 ntBASIC6.23□□□□□ -1.41
TPM4P67936 FRG1EP-201ENST00000634469 770 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms