Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 AL391261.1-201ENST00000555712 1479 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 AC079949.2-201ENST00000617117 2933 ntBASIC6.53□□□□□ -1.36
YBX1P67809 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
YBX1P67809 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 AL137058.3-201ENST00000624531 3099 ntBASIC6.53□□□□□ -1.36
YBX1P67809 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 PPIAP26-201ENST00000377951 522 ntBASIC6.53□□□□□ -1.36
YBX1P67809 U6.112-201ENST00000384129 70 ntBASIC6.53□□□□□ -1.36
YBX1P67809 Y_RNA.517-201ENST00000384551 106 ntBASIC6.53□□□□□ -1.36
YBX1P67809 LDHAP5-201ENST00000394996 622 ntBASIC6.53□□□□□ -1.36
YBX1P67809 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 CYCSP17-201ENST00000407870 315 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 RPL23AP85-201ENST00000421838 433 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 MTCO1P52-201ENST00000433928 531 ntBASIC6.53□□□□□ -1.36
YBX1P67809 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 RPL6P30-201ENST00000443382 862 ntBASIC6.53□□□□□ -1.36
YBX1P67809 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.53□□□□□ -1.36
YBX1P67809 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.53□□□□□ -1.36
YBX1P67809 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.53□□□□□ -1.36
YBX1P67809 AL359385.1-201ENST00000456509 365 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 RPS3AP49-201ENST00000472161 790 ntBASIC6.53□□□□□ -1.36
YBX1P67809 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 RN7SL70P-201ENST00000478322 302 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 AC093878.1-201ENST00000515630 432 ntBASIC6.53□□□□□ -1.36
YBX1P67809 RN7SKP5-201ENST00000517045 272 ntBASIC6.53□□□□□ -1.36
YBX1P67809 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.53□□□□□ -1.36
YBX1P67809 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.53□□□□□ -1.36
YBX1P67809 HMGN1P26-201ENST00000558737 303 ntBASIC6.53□□□□□ -1.36
YBX1P67809 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 MIR4789-201ENST00000577469 82 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AC015688.2-201ENST00000584523 262 ntBASIC6.53□□□□□ -1.36
YBX1P67809 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 AC091135.1-201ENST00000585943 307 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AC072039.2-201ENST00000608883 439 ntBASIC6.53□□□□□ -1.36
YBX1P67809 RMST_10.1-201ENST00000616309 154 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AL359314.1-201ENST00000616913 261 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AL356266.1-201ENST00000623311 483 ntBASIC6.53□□□□□ -1.36
YBX1P67809 AC022140.2-201ENST00000623500 188 ntBASIC6.53□□□□□ -1.36
YBX1P67809 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.53□□□□□ -1.36
YBX1P67809 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
YBX1P67809 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.53□□□□□ -1.36
YBX1P67809 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.53□□□□□ -1.36
YBX1P67809 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 AC012020.1-201ENST00000624541 1728 ntBASIC6.53□□□□□ -1.36
YBX1P67809 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 Z93929.1-201ENST00000418200 1475 ntBASIC6.53□□□□□ -1.36
YBX1P67809 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
YBX1P67809 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
YBX1P67809 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.53□□□□□ -1.36
YBX1P67809 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.52□□□□□ -1.36
YBX1P67809 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
YBX1P67809 NEK2P2-201ENST00000438441 1338 ntBASIC6.52□□□□□ -1.37
YBX1P67809 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
YBX1P67809 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
YBX1P67809 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms