Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 SNORA64.1-201ENST00000362600 132 ntBASIC5.86□□□□□ -1.47
CDH6P55285 RNU11-201ENST00000387069 134 ntBASIC5.86□□□□□ -1.47
CDH6P55285 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDH6P55285 SLC20A1P1-201ENST00000413906 956 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AC127526.2-201ENST00000426436 775 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH6P55285 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 AC138761.5-201ENST00000433967 325 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH6P55285 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH6P55285 SNORD125-201ENST00000459538 96 ntBASIC5.86□□□□□ -1.47
CDH6P55285 RPS23P6-201ENST00000466136 431 ntBASIC5.86□□□□□ -1.47
CDH6P55285 DUTP7-201ENST00000507982 486 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AC021733.2-201ENST00000518830 497 ntBASIC5.86□□□□□ -1.47
CDH6P55285 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH6P55285 AC079600.1-201ENST00000550326 297 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH6P55285 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.86□□□□□ -1.47
CDH6P55285 NDUFA5P11-201ENST00000567995 343 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.86□□□□□ -1.47
CDH6P55285 AL360012.1-201ENST00000602813 131 ntBASIC5.86□□□□□ -1.47
CDH6P55285 RN7SL544P-201ENST00000617232 284 ntBASIC5.86□□□□□ -1.47
CDH6P55285 MIR6778-201ENST00000617912 73 ntBASIC5.86□□□□□ -1.47
CDH6P55285 RN7SL763P-201ENST00000620922 284 ntBASIC5.86□□□□□ -1.47
CDH6P55285 AC087565.3-203ENST00000641018 837 ntBASIC5.86□□□□□ -1.47
CDH6P55285 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH6P55285 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDH6P55285 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 AL360270.2-201ENST00000562952 5985 ntBASIC5.85□□□□□ -1.47
CDH6P55285 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH6P55285 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 OR52B3P-201ENST00000314715 928 ntBASIC5.85□□□□□ -1.47
CDH6P55285 MIR375-201ENST00000362103 64 ntBASIC5.85□□□□□ -1.47
CDH6P55285 RNA5SP453-201ENST00000362503 119 ntBASIC5.85□□□□□ -1.47
CDH6P55285 RN7SKP185-201ENST00000362813 326 ntBASIC5.85□□□□□ -1.47
CDH6P55285 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 RAB5CP1-201ENST00000395972 580 ntBASIC5.85□□□□□ -1.47
CDH6P55285 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH6P55285 NANOGP9-201ENST00000439890 892 ntBASIC5.85□□□□□ -1.47
CDH6P55285 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH6P55285 NXT1P1-201ENST00000458481 316 ntBASIC5.85□□□□□ -1.47
CDH6P55285 MRE11P1-201ENST00000464884 2127 ntBASIC5.85□□□□□ -1.47
CDH6P55285 ATP5LP5-201ENST00000483050 299 ntBASIC5.85□□□□□ -1.47
CDH6P55285 NPM1P21-201ENST00000513394 762 ntBASIC5.85□□□□□ -1.47
CDH6P55285 RN7SKP253-201ENST00000516424 309 ntBASIC5.85□□□□□ -1.47
CDH6P55285 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH6P55285 PMS2P3-207ENST00000529061 717 ntBASIC5.85□□□□□ -1.47
CDH6P55285 HMGB1P42-201ENST00000532126 553 ntBASIC5.85□□□□□ -1.47
CDH6P55285 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH6P55285 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH6P55285 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH6P55285 DPPA2P4-201ENST00000563717 878 ntBASIC5.85□□□□□ -1.47
CDH6P55285 MIR4311-201ENST00000580794 100 ntBASIC5.85□□□□□ -1.47
CDH6P55285 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH6P55285 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH6P55285 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.85□□□□□ -1.47
CDH6P55285 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH6P55285 AL390318.1-201ENST00000624564 687 ntBASIC5.85□□□□□ -1.47
CDH6P55285 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDH6P55285 AC018809.2-201ENST00000602436 3823 ntBASIC5.85□□□□□ -1.47
CDH6P55285 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH6P55285 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDH6P55285 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH6P55285 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 AC009962.1-201ENST00000567327 3813 ntBASIC5.84□□□□□ -1.47
CDH6P55285 AC106872.5-201ENST00000508856 1416 ntBASIC5.84□□□□□ -1.47
CDH6P55285 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH6P55285 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 AC144833.1-201ENST00000567953 4089 ntBASIC5.84□□□□□ -1.47
CDH6P55285 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH6P55285 GAPDHP24-201ENST00000328713 983 ntBASIC5.84□□□□□ -1.47
CDH6P55285 NACAP7-201ENST00000407371 609 ntBASIC5.84□□□□□ -1.47
CDH6P55285 RMRPP5-201ENST00000411156 267 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms