Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USP11P51784 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.51□□□□□ -1.21
USP11P51784 AP000866.6-201ENST00000638898 3579 ntBASIC7.51□□□□□ -1.21
USP11P51784 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USP11P51784 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USP11P51784 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.51□□□□□ -1.21
USP11P51784 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
USP11P51784 AC087392.3-202ENST00000358446 1754 ntBASIC7.51□□□□□ -1.21
USP11P51784 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.51□□□□□ -1.21
USP11P51784 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USP11P51784 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USP11P51784 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
USP11P51784 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.5□□□□□ -1.21
USP11P51784 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 BX005019.1-201ENST00000561881 1810 ntBASIC7.5□□□□□ -1.21
USP11P51784 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.5□□□□□ -1.21
USP11P51784 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.5□□□□□ -1.21
USP11P51784 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 U3.52-201ENST00000384034 216 ntBASIC7.5□□□□□ -1.21
USP11P51784 RNY3P14-201ENST00000384309 102 ntBASIC7.5□□□□□ -1.21
USP11P51784 Y_RNA.472-201ENST00000384322 102 ntBASIC7.5□□□□□ -1.21
USP11P51784 RNU6-83P-201ENST00000384568 112 ntBASIC7.5□□□□□ -1.21
USP11P51784 VIM2P-201ENST00000402383 1294 ntBASIC7.5□□□□□ -1.21
USP11P51784 UBTFL2-201ENST00000411859 1191 ntBASIC7.5□□□□□ -1.21
USP11P51784 RPEP4-201ENST00000437636 602 ntBASIC7.5□□□□□ -1.21
USP11P51784 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 AL031681.1-201ENST00000443304 400 ntBASIC7.5□□□□□ -1.21
USP11P51784 CCNJP1-201ENST00000450600 1149 ntBASIC7.5□□□□□ -1.21
USP11P51784 MRPL35P4-201ENST00000453682 566 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC063943.2-201ENST00000495697 534 ntBASIC7.5□□□□□ -1.21
USP11P51784 RN7SL612P-201ENST00000497704 295 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC093870.1-201ENST00000506837 213 ntBASIC7.5□□□□□ -1.21
USP11P51784 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
USP11P51784 AC138938.1-201ENST00000515431 782 ntBASIC7.5□□□□□ -1.21
USP11P51784 MRPS5P3-201ENST00000515577 166 ntBASIC7.5□□□□□ -1.21
USP11P51784 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.5□□□□□ -1.21
USP11P51784 OR4R3P-201ENST00000525084 838 ntBASIC7.5□□□□□ -1.21
USP11P51784 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 CCNG2P1-201ENST00000549521 1000 ntBASIC7.5□□□□□ -1.21
USP11P51784 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.5□□□□□ -1.21
USP11P51784 MIR3157-201ENST00000578688 85 ntBASIC7.5□□□□□ -1.21
USP11P51784 ARGFXP2-201ENST00000579304 949 ntBASIC7.5□□□□□ -1.21
USP11P51784 RN7SL66P-201ENST00000582099 264 ntBASIC7.5□□□□□ -1.21
USP11P51784 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.5□□□□□ -1.21
USP11P51784 AL356986.1-201ENST00000604085 341 ntBASIC7.5□□□□□ -1.21
USP11P51784 AL359704.2-201ENST00000604335 521 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC139493.1-201ENST00000604368 397 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC015849.2-201ENST00000605738 409 ntBASIC7.5□□□□□ -1.21
USP11P51784 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC024595.1-201ENST00000623088 387 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC090617.9-201ENST00000623751 147 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC079248.2-201ENST00000623779 326 ntBASIC7.5□□□□□ -1.21
USP11P51784 AC068213.1-201ENST00000625124 226 ntBASIC7.5□□□□□ -1.21
USP11P51784 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
USP11P51784 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
USP11P51784 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 AC005702.3-201ENST00000585345 1447 ntBASIC7.5□□□□□ -1.21
USP11P51784 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.5□□□□□ -1.21
USP11P51784 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 ZNF658B-201ENST00000602828 3408 ntBASIC7.5□□□□□ -1.21
USP11P51784 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.5□□□□□ -1.21
USP11P51784 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
USP11P51784 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.49□□□□□ -1.21
USP11P51784 CYP2G2P-201ENST00000594920 1485 ntBASIC7.49□□□□□ -1.21
USP11P51784 NBPF8-201ENST00000583271 5330 ntBASIC7.49□□□□□ -1.21
USP11P51784 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.49□□□□□ -1.21
USP11P51784 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.49□□□□□ -1.21
USP11P51784 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
USP11P51784 OR2M1P-201ENST00000318104 951 ntBASIC7.49□□□□□ -1.21
USP11P51784 RNA5SP85-201ENST00000365378 119 ntBASIC7.49□□□□□ -1.21
USP11P51784 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.49□□□□□ -1.21
USP11P51784 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.49□□□□□ -1.21
USP11P51784 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USP11P51784 GAPDHP19-201ENST00000431768 1005 ntBASIC7.49□□□□□ -1.21
USP11P51784 AC092106.2-201ENST00000436597 487 ntBASIC7.49□□□□□ -1.21
USP11P51784 RPS24P1-201ENST00000438550 371 ntBASIC7.49□□□□□ -1.21
USP11P51784 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.49□□□□□ -1.21
USP11P51784 OR52Y1P-201ENST00000452418 828 ntBASIC7.49□□□□□ -1.21
USP11P51784 RPS6P2-201ENST00000454208 705 ntBASIC7.49□□□□□ -1.21
USP11P51784 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.49□□□□□ -1.21
USP11P51784 RN7SKP34-201ENST00000516142 244 ntBASIC7.49□□□□□ -1.21
USP11P51784 RNU6-1178P-201ENST00000516674 107 ntBASIC7.49□□□□□ -1.21
USP11P51784 RNU6-1028P-201ENST00000517164 93 ntBASIC7.49□□□□□ -1.21
USP11P51784 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms