Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 HDAC1P2-201ENST00000453661 1398 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 SMG1P7-201ENST00000565246 2704 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AL353743.3-201ENST00000442109 1468 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC004817.4-201ENST00000602396 3625 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC083843.3-201ENST00000623679 2186 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HOXA1P49639 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HOXA1P49639 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 RBPJP2-201ENST00000618187 1444 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXA1P49639 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HOXA1P49639 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 CTSL3P-202ENST00000412179 788 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXA1P49639 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC015977.1-201ENST00000418887 292 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC016908.1-201ENST00000442571 1219 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AL356133.1-201ENST00000444762 372 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC023271.1-201ENST00000445936 1090 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 RPL31P20-201ENST00000449593 360 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 RAB28P2-201ENST00000454299 641 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 LDHBP2-201ENST00000456969 1005 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AKR1D1P1-201ENST00000457236 936 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 EIF2S2P5-201ENST00000457635 968 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC105918.1-201ENST00000474399 838 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 RN7SL346P-201ENST00000491561 294 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC105391.1-201ENST00000503155 1045 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 HMGB1P47-201ENST00000511281 589 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC067904.2-201ENST00000517322 1283 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA1P49639 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC027229.1-201ENST00000583887 253 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 MIMT1-201ENST00000597105 1050 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXA1P49639 AL512430.4-201ENST00000603085 613 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AC027334.1-201ENST00000603257 310 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AL137000.1-201ENST00000610528 1244 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 MIR8082-201ENST00000612488 81 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 CR589904.2-201ENST00000612533 440 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC095038.2-201ENST00000621464 1070 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
HOXA1P49639 AP003108.4-201ENST00000623917 878 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 MAPK10-350ENST00000641777 965 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC025574.1-201ENST00000554784 1653 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA1P49639 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXA1P49639 AC011755.1-201ENST00000623763 2049 ntBASIC5.01□□□□□ -1.61
HOXA1P49639 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA1P49639 SLC2A3P4-201ENST00000521259 1471 ntBASIC5□□□□□ -1.61
HOXA1P49639 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 OR4K17-201ENST00000315543 1032 ntBASIC5□□□□□ -1.61
HOXA1P49639 SNORD51.1-201ENST00000365405 77 ntBASIC5□□□□□ -1.61
HOXA1P49639 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 MRPL32P1-201ENST00000406301 247 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms