Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CSNK1A1P48729 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC126615.2-201ENST00000553003 515 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC105036.1-201ENST00000566222 271 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AP005432.1-201ENST00000580891 3485 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AL031601.1-201ENST00000605702 394 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC090607.5-201ENST00000615692 224 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AL589935.2-201ENST00000616471 1231 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC092451.3-201ENST00000625067 1343 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC073869.7-201ENST00000640874 297 ntBASIC5.1□□□□□ -1.59
CSNK1A1P48729 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CSNK1A1P48729 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AC026523.2-201ENST00000625039 7739 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 MIR133A2-201ENST00000347538 102 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 RNU1-150P-201ENST00000362491 162 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 RN7SKP279-201ENST00000411383 298 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 NIFKP3-201ENST00000417799 865 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 RN7SL570P-201ENST00000484405 292 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 DUTP1-201ENST00000493631 470 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 SCARNA6.1-201ENST00000516989 238 ntBASIC5.09□□□□□ -1.59
CSNK1A1P48729 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSNK1A1P48729 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.09□□□□□ -1.59
CSNK1A1P48729 AC093671.1-201ENST00000624981 2929 ntBASIC5.09□□□□□ -1.6
CSNK1A1P48729 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CSNK1A1P48729 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CSNK1A1P48729 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CSNK1A1P48729 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.09□□□□□ -1.6
CSNK1A1P48729 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC011933.2-201ENST00000578539 2790 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RNA5SP453-201ENST00000362503 119 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 MIR621-201ENST00000384919 96 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 MIR130A-201ENST00000385274 89 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC242426.1-201ENST00000435270 960 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 DNAJA1P5-201ENST00000440278 943 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC022215.1-201ENST00000481770 362 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 RPS7P6-201ENST00000485777 579 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 RPL32P33-201ENST00000487023 394 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RN7SL284P-201ENST00000498823 275 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 NENFP3-201ENST00000503735 313 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms