Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC119674.1-212ENST00000641155 993 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 AC034111.1-201ENST00000562143 3770 ntBASIC6.37□□□□□ -1.39
HOXC12P31275 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
HOXC12P31275 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
HOXC12P31275 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC12P31275 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC12P31275 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXC12P31275 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 TMSB4XP2-201ENST00000335179 210 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 IL6STP1-201ENST00000346911 1020 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXC12P31275 RNU6-666P-201ENST00000363499 107 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 RNU4-81P-201ENST00000363561 144 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 RNU6-1200P-201ENST00000384162 107 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 RPS3AP5-201ENST00000389400 821 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXC12P31275 EEF1GP6-201ENST00000402309 905 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AL031577.2-201ENST00000404133 280 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 PRELID1P2-201ENST00000407805 396 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 NANOGP4-201ENST00000427230 913 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 MTCO1P3-201ENST00000429327 192 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 MTCO1P52-201ENST00000433928 531 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 HMGB1P45-201ENST00000435986 653 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 GTF3AP5-201ENST00000442645 697 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 WDR82P2-201ENST00000444540 928 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 ARL5AP2-201ENST00000444698 533 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 RPL23P10-201ENST00000468780 412 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 GLRXP3-201ENST00000470810 321 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC104689.1-201ENST00000473356 768 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 RN7SL790P-201ENST00000474043 298 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC012123.2-201ENST00000485809 248 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 OR7E157P-201ENST00000494376 911 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC008496.1-201ENST00000509131 295 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC008885.2-201ENST00000509506 930 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 IGLVI-42-201ENST00000522485 381 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 OR7E154P-201ENST00000525174 932 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 AC126177.6-201ENST00000550420 1009 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AL031846.1-201ENST00000560933 314 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC244034.2-201ENST00000562504 509 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC096708.2-201ENST00000577676 512 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC12P31275 AL023806.2-201ENST00000603042 263 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AC113361.1-201ENST00000606683 543 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC004223.4-201ENST00000612426 332 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms