Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 TRIM51GP-201ENST00000534741 1350 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 SEPT7P2-202ENST00000398921 823 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 UBTFL2-201ENST00000411859 1191 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AL356968.2-201ENST00000412769 1257 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40LGP29965 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40LGP29965 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CD40LGP29965 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 AL022324.2-201ENST00000434827 780 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40LGP29965 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40LGP29965 GTF3AP5-201ENST00000442645 697 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AL020997.1-201ENST00000446554 349 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 MEMO1P4-201ENST00000453590 386 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 RNU1-88P-201ENST00000459274 128 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.07□□□□□ -1.6
CD40LGP29965 RFPL4AP3-201ENST00000515267 345 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40LGP29965 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 SETP1-201ENST00000556014 845 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 AC005479.3-201ENST00000602790 431 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 GAPDHP41-201ENST00000613707 975 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 AL035661.1-201ENST00000620459 1144 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AC211486.4-201ENST00000621495 113 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.07□□□□□ -1.6
CD40LGP29965 AC006840.1-201ENST00000623069 542 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 AP001962.1-201ENST00000624114 559 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40LGP29965 OR4F13P-202ENST00000560066 2054 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40LGP29965 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 SMG1P4-204ENST00000523028 4131 ntBASIC5.07□□□□□ -1.6
CD40LGP29965 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40LGP29965 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.06□□□□□ -1.6
CD40LGP29965 RBMY1HP-201ENST00000382759 1389 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 CASC19-248ENST00000641674 1356 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 AL034549.2-201ENST00000618285 3373 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 AC007618.1-201ENST00000366455 732 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 MIR191-201ENST00000384873 92 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 PSMA6P1-201ENST00000400275 741 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 RPL21P67-201ENST00000402896 478 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 PRELID1P1-201ENST00000403549 660 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 Z82198.3-201ENST00000421145 199 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 HSPD1P12-201ENST00000429127 1069 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD40LGP29965 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.06□□□□□ -1.6
CD40LGP29965 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CD40LGP29965 EMC3-AS1-205ENST00000438698 534 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 SNRPFP2-201ENST00000440710 251 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.06□□□□□ -1.6
CD40LGP29965 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.06□□□□□ -1.6
CD40LGP29965 POU5F1P5-201ENST00000445059 658 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.06□□□□□ -1.6
CD40LGP29965 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.06□□□□□ -1.6
CD40LGP29965 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.06□□□□□ -1.6
CD40LGP29965 RN7SL346P-201ENST00000491561 294 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.06□□□□□ -1.6
CD40LGP29965 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
CD40LGP29965 RN7SKP5-201ENST00000517045 272 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.06□□□□□ -1.6
CD40LGP29965 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.06□□□□□ -1.6
CD40LGP29965 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.06□□□□□ -1.6
CD40LGP29965 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.06□□□□□ -1.6
CD40LGP29965 RN7SL230P-201ENST00000580835 303 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 AC233702.9-201ENST00000581528 203 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 PRPF19P1-201ENST00000584766 898 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 RPL29P33-201ENST00000587474 316 ntBASIC5.06□□□□□ -1.6
CD40LGP29965 AC022106.1-201ENST00000612834 766 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms