Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 RPL34P20-201ENST00000442771 351 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 PMS2P3-207ENST00000529061 717 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 AC021006.3-201ENST00000530771 192 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A5P29400 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC006115.2-201ENST00000596823 202 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 AL513327.3-201ENST00000602618 469 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 HIRAP1-201ENST00000605318 787 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC006206.1-201ENST00000544842 3387 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
COL4A5P29400 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC005725.1-201ENST00000577346 2607 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL4A5P29400 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 ZNF840P-201ENST00000504759 1996 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 DBIP1-201ENST00000401435 260 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 OR2AM1P-201ENST00000422137 422 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 VN1R21P-201ENST00000426703 765 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC058823.1-201ENST00000485315 474 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC137627.1-201ENST00000545761 289 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A5P29400 AC099494.2-201ENST00000623371 978 ntBASIC6.52□□□□□ -1.37
COL4A5P29400 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL4A5P29400 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A5P29400 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL4A5P29400 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
COL4A5P29400 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 RN7SKP149-201ENST00000363008 344 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RNU6-398P-201ENST00000384143 109 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL4A5P29400 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A5P29400 RPL7P56-201ENST00000429441 717 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 RN7SL205P-201ENST00000490174 284 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RPS17P5-201ENST00000498293 408 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A5P29400 RPS4XP20-201ENST00000505751 772 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RAB9BP1-201ENST00000519581 626 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RN7SL52P-201ENST00000584271 284 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
COL4A5P29400 AL031320.1-201ENST00000604177 357 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 CYCSP1-201ENST00000604815 315 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 AC005084.1-201ENST00000605160 304 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 AC083809.1-201ENST00000615051 472 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RN7SL722P-201ENST00000617780 284 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 RN7SL565P-201ENST00000618246 284 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 MIR6758-201ENST00000620653 63 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 AP000866.6-201ENST00000638898 3579 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A5P29400 DOCK11P1-201ENST00000553480 5932 ntBASIC6.51□□□□□ -1.37
COL4A5P29400 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A5P29400 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A5P29400 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL4A5P29400 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 AL121886.1-201ENST00000358609 435 ntBASIC6.5□□□□□ -1.37
COL4A5P29400 AL138878.2-201ENST00000440581 1241 ntBASIC6.5□□□□□ -1.37
COL4A5P29400 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms