Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
MMP11P24347 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
MMP11P24347 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
MMP11P24347 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
MMP11P24347 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 BMS1P17-202ENST00000416720 316 ntBASIC5.46□□□□□ -1.54
MMP11P24347 RPS12P17-201ENST00000438591 377 ntBASIC5.46□□□□□ -1.54
MMP11P24347 AC023141.8-201ENST00000442554 208 ntBASIC5.46□□□□□ -1.54
MMP11P24347 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.46□□□□□ -1.54
MMP11P24347 RSU1P1-201ENST00000453416 441 ntBASIC5.46□□□□□ -1.54
MMP11P24347 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.46□□□□□ -1.54
MMP11P24347 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.46□□□□□ -1.54
MMP11P24347 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 RN7SL284P-201ENST00000498823 275 ntBASIC5.46□□□□□ -1.54
MMP11P24347 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.46□□□□□ -1.54
MMP11P24347 AC109481.1-201ENST00000509173 282 ntBASIC5.46□□□□□ -1.54
MMP11P24347 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.46□□□□□ -1.54
MMP11P24347 AC007346.2-201ENST00000564816 892 ntBASIC5.46□□□□□ -1.54
MMP11P24347 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.46□□□□□ -1.54
MMP11P24347 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.46□□□□□ -1.54
MMP11P24347 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.46□□□□□ -1.54
MMP11P24347 MIR4505-201ENST00000582238 73 ntBASIC5.46□□□□□ -1.54
MMP11P24347 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.46□□□□□ -1.54
MMP11P24347 AL691477.1-201ENST00000624398 162 ntBASIC5.46□□□□□ -1.54
MMP11P24347 AC022919.1-201ENST00000624979 626 ntBASIC5.46□□□□□ -1.54
MMP11P24347 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.46□□□□□ -1.54
MMP11P24347 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
MMP11P24347 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP11P24347 CIR1P2-201ENST00000514821 1342 ntBASIC5.46□□□□□ -1.54
MMP11P24347 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP11P24347 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
MMP11P24347 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
MMP11P24347 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP11P24347 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 HMGB3P24-201ENST00000433260 622 ntBASIC5.45□□□□□ -1.54
MMP11P24347 Z84478.1-201ENST00000438230 1219 ntBASIC5.45□□□□□ -1.54
MMP11P24347 VN1R96P-201ENST00000446052 858 ntBASIC5.45□□□□□ -1.54
MMP11P24347 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP11P24347 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 AL603882.1-201ENST00000463059 681 ntBASIC5.45□□□□□ -1.54
MMP11P24347 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 RN7SL214P-201ENST00000487317 265 ntBASIC5.45□□□□□ -1.54
MMP11P24347 OR7E157P-201ENST00000494376 911 ntBASIC5.45□□□□□ -1.54
MMP11P24347 NPM1P21-201ENST00000513394 762 ntBASIC5.45□□□□□ -1.54
MMP11P24347 AC078899.1-201ENST00000521432 1185 ntBASIC5.45□□□□□ -1.54
MMP11P24347 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 HMGB1P42-201ENST00000532126 553 ntBASIC5.45□□□□□ -1.54
MMP11P24347 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP11P24347 AC007225.2-201ENST00000562529 256 ntBASIC5.45□□□□□ -1.54
MMP11P24347 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP11P24347 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.45□□□□□ -1.54
MMP11P24347 FO393422.1-201ENST00000603908 708 ntBASIC5.45□□□□□ -1.54
MMP11P24347 AL589674.2-201ENST00000604304 337 ntBASIC5.45□□□□□ -1.54
MMP11P24347 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP11P24347 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP11P24347 AC004076.2-201ENST00000620532 3323 ntBASIC5.45□□□□□ -1.54
MMP11P24347 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
MMP11P24347 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
MMP11P24347 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP11P24347 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
MMP11P24347 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
MMP11P24347 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
MMP11P24347 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
MMP11P24347 DNM1P47-203ENST00000571780 12667 ntBASIC5.44□□□□□ -1.54
MMP11P24347 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MMP11P24347 SNORA64.1-201ENST00000362600 132 ntBASIC5.44□□□□□ -1.54
MMP11P24347 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP11P24347 AC019205.1-201ENST00000421830 730 ntBASIC5.44□□□□□ -1.54
MMP11P24347 AL662874.1-201ENST00000426065 230 ntBASIC5.44□□□□□ -1.54
MMP11P24347 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.44□□□□□ -1.54
MMP11P24347 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms