Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.51□□□□□ -0.89
TOP2AP11388 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 AC005725.1-201ENST00000577346 2607 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 U3.3-201ENST00000362986 216 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 RN7SKP103-201ENST00000363848 320 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
TOP2AP11388 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 AC093162.1-201ENST00000419682 124 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC9.51□□□□□ -0.89
TOP2AP11388 RPL12P17-201ENST00000432393 498 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 KRT8P51-201ENST00000438938 274 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 AC092647.3-201ENST00000443044 633 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.51□□□□□ -0.89
TOP2AP11388 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC9.51□□□□□ -0.89
TOP2AP11388 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC9.51□□□□□ -0.89
TOP2AP11388 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC9.51□□□□□ -0.89
TOP2AP11388 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC9.51□□□□□ -0.89
TOP2AP11388 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC9.51□□□□□ -0.89
TOP2AP11388 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.5□□□□□ -0.89
TOP2AP11388 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
TOP2AP11388 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TOP2AP11388 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC9.5□□□□□ -0.89
TOP2AP11388 AC006600.2-201ENST00000624834 2506 ntBASIC9.5□□□□□ -0.89
TOP2AP11388 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC9.5□□□□□ -0.89
TOP2AP11388 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC9.5□□□□□ -0.89
TOP2AP11388 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
TOP2AP11388 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 SNORD56.6-201ENST00000384569 71 ntBASIC9.5□□□□□ -0.89
TOP2AP11388 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.5□□□□□ -0.89
TOP2AP11388 AC002075.1-201ENST00000457396 676 ntBASIC9.5□□□□□ -0.89
TOP2AP11388 MGST2-204ENST00000506797 634 ntTSL 2 BASIC9.5□□□□□ -0.89
TOP2AP11388 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC9.5□□□□□ -0.89
TOP2AP11388 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC9.5□□□□□ -0.89
TOP2AP11388 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
TOP2AP11388 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 AC074101.1-201ENST00000637861 241 ntBASIC9.5□□□□□ -0.89
TOP2AP11388 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.5□□□□□ -0.89
TOP2AP11388 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
TOP2AP11388 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 AL353625.1-202ENST00000366273 571 ntBASIC9.49□□□□□ -0.89
TOP2AP11388 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 AL078599.1-201ENST00000402075 293 ntBASIC9.49□□□□□ -0.89
TOP2AP11388 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC9.49□□□□□ -0.89
TOP2AP11388 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
TOP2AP11388 PDCL3P4-201ENST00000489621 720 ntBASIC9.49□□□□□ -0.89
TOP2AP11388 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.49□□□□□ -0.89
TOP2AP11388 AC093799.2-201ENST00000610062 578 ntBASIC9.49□□□□□ -0.89
TOP2AP11388 AL450226.2-201ENST00000622913 439 ntBASIC9.49□□□□□ -0.89
TOP2AP11388 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 OR4F13P-202ENST00000560066 2054 ntBASIC9.49□□□□□ -0.89
TOP2AP11388 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.49□□□□□ -0.89
TOP2AP11388 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
TOP2AP11388 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TOP2AP11388 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOP2AP11388 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
TOP2AP11388 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOP2AP11388 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 AC092747.4-201ENST00000620519 1861 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOP2AP11388 RNU1-59P-201ENST00000364829 162 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 SNORA51.8-201ENST00000384234 132 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TOP2AP11388 RIMKLBP2-201ENST00000424737 654 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.48□□□□□ -0.89
TOP2AP11388 AC097484.1-201ENST00000471148 389 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC9.48□□□□□ -0.89
TOP2AP11388 RN7SL423P-201ENST00000486202 304 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 AC109464.1-201ENST00000511091 819 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 IGHVII-44-2-201ENST00000517728 250 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 U1.25-201ENST00000614085 162 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 U1.34-201ENST00000618578 162 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 U1.31-201ENST00000620022 160 ntBASIC9.48□□□□□ -0.89
TOP2AP11388 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
TOP2AP11388 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TOP2AP11388 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TOP2AP11388 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.48□□□□□ -0.89
TOP2AP11388 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
TOP2AP11388 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TOP2AP11388 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TOP2AP11388 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
TOP2AP11388 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC9.47□□□□□ -0.89
TOP2AP11388 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC9.47□□□□□ -0.89
TOP2AP11388 AC009127.1-201ENST00000467090 155 ntBASIC9.47□□□□□ -0.89
TOP2AP11388 AC058823.1-201ENST00000485315 474 ntBASIC9.47□□□□□ -0.89
TOP2AP11388 OR51K1P-201ENST00000510214 950 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms