Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RN7SL547P-201ENST00000490793 290 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.09□□□□□ -1.59
FREM3P0C091 AC136777.2-201ENST00000522979 358 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.09□□□□□ -1.59
FREM3P0C091 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 AC079600.1-201ENST00000550326 297 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.09□□□□□ -1.59
FREM3P0C091 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 AL162456.1-201ENST00000634535 2006 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FREM3P0C091 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.09□□□□□ -1.59
FREM3P0C091 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FREM3P0C091 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
FREM3P0C091 NPM1P4-201ENST00000414095 812 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 BMS1P13-201ENST00000417301 885 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AL139148.1-201ENST00000427122 680 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 LYPLA1P1-201ENST00000434514 622 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AL627308.1-201ENST00000435693 821 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 OR6D1P-201ENST00000436165 939 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.09□□□□□ -1.59
FREM3P0C091 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.09□□□□□ -1.59
FREM3P0C091 AZGP1P2-201ENST00000454506 345 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC023245.1-201ENST00000468501 517 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FREM3P0C091 DUTP1-201ENST00000493631 470 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 RPS17P5-201ENST00000498293 408 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 SCARNA9-201ENST00000530422 353 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 HMGB1P42-201ENST00000532126 553 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC016180.1-201ENST00000567945 403 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.09□□□□□ -1.59
FREM3P0C091 NANOGP3-201ENST00000605855 286 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AL352984.2-202ENST00000613699 155 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
FREM3P0C091 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
FREM3P0C091 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 RNU11-201ENST00000387069 134 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 AURKAPS1-201ENST00000451805 1212 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC027308.1-201ENST00000517993 110 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC078878.1-201ENST00000539832 958 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 OR7E18P-201ENST00000592589 702 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AL360012.1-201ENST00000602813 131 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.08□□□□□ -1.6
FREM3P0C091 AL139407.1-201ENST00000613826 1175 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 AC144833.1-201ENST00000567953 4089 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 AL355834.1-201ENST00000556602 3965 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 AL158152.1-201ENST00000602652 1435 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 EPS15P1-202ENST00000459691 2071 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 MIR133B-201ENST00000362210 119 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 GAPDHP42-201ENST00000406848 981 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 COPS8P2-201ENST00000473228 627 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AC079080.1-201ENST00000479841 822 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC000068.2-201ENST00000608816 460 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 AC132068.1-201ENST00000623805 459 ntBASIC5.08□□□□□ -1.6
FREM3P0C091 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.08□□□□□ -1.6
FREM3P0C091 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.08□□□□□ -1.6
FREM3P0C091 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FREM3P0C091 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms