Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CD48P09326 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD48P09326 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD48P09326 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
CD48P09326 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
CD48P09326 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.84□□□□□ -1.47
CD48P09326 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD48P09326 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CD48P09326 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.84□□□□□ -1.48
CD48P09326 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
CD48P09326 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.84□□□□□ -1.48
CD48P09326 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD48P09326 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD48P09326 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 RNA5SP394-201ENST00000364216 119 ntBASIC5.83□□□□□ -1.48
CD48P09326 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD48P09326 HMGB1P20-201ENST00000402555 677 ntBASIC5.83□□□□□ -1.48
CD48P09326 RPSAP35-201ENST00000413753 818 ntBASIC5.83□□□□□ -1.48
CD48P09326 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
CD48P09326 AL022331.1-201ENST00000429025 477 ntBASIC5.83□□□□□ -1.48
CD48P09326 TMEM183AP1-205ENST00000432739 290 ntBASIC5.83□□□□□ -1.48
CD48P09326 NANOGP9-201ENST00000439890 892 ntBASIC5.83□□□□□ -1.48
CD48P09326 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.83□□□□□ -1.48
CD48P09326 AC111000.6-201ENST00000514471 709 ntBASIC5.83□□□□□ -1.48
CD48P09326 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.83□□□□□ -1.48
CD48P09326 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 AC125494.2-201ENST00000602431 657 ntBASIC5.83□□□□□ -1.48
CD48P09326 AC002069.2-201ENST00000603580 883 ntBASIC5.83□□□□□ -1.48
CD48P09326 AL161912.3-201ENST00000605404 628 ntBASIC5.83□□□□□ -1.48
CD48P09326 AL365181.4-201ENST00000609800 547 ntBASIC5.83□□□□□ -1.48
CD48P09326 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 AL512356.3-201ENST00000623005 461 ntBASIC5.83□□□□□ -1.48
CD48P09326 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CD48P09326 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 AC013268.3-201ENST00000262716 2324 ntBASIC5.83□□□□□ -1.48
CD48P09326 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 AP005435.3-201ENST00000531260 3198 ntBASIC5.83□□□□□ -1.48
CD48P09326 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
CD48P09326 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD48P09326 OR4F13P-202ENST00000560066 2054 ntBASIC5.83□□□□□ -1.48
CD48P09326 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CD48P09326 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.82□□□□□ -1.48
CD48P09326 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CD48P09326 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.82□□□□□ -1.48
CD48P09326 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CD48P09326 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CD48P09326 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CD48P09326 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CD48P09326 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CD48P09326 SNORA5.1-201ENST00000384275 131 ntBASIC5.82□□□□□ -1.48
CD48P09326 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CD48P09326 AC240504.1-201ENST00000395709 845 ntBASIC5.82□□□□□ -1.48
CD48P09326 RNU2-18P-201ENST00000411224 162 ntBASIC5.82□□□□□ -1.48
CD48P09326 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.82□□□□□ -1.48
CD48P09326 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CD48P09326 AC012497.1-201ENST00000429392 575 ntBASIC5.82□□□□□ -1.48
CD48P09326 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.82□□□□□ -1.48
CD48P09326 AC138761.5-201ENST00000433967 325 ntBASIC5.82□□□□□ -1.48
CD48P09326 AC006335.2-201ENST00000437993 330 ntBASIC5.82□□□□□ -1.48
CD48P09326 PCNPP2-201ENST00000441651 455 ntBASIC5.82□□□□□ -1.48
CD48P09326 AL596266.1-201ENST00000448132 400 ntBASIC5.82□□□□□ -1.48
CD48P09326 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.82□□□□□ -1.48
CD48P09326 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.82□□□□□ -1.48
CD48P09326 RPS3AP15-201ENST00000483874 781 ntBASIC5.82□□□□□ -1.48
CD48P09326 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.82□□□□□ -1.48
CD48P09326 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.82□□□□□ -1.48
CD48P09326 IGKV2-4-201ENST00000523070 340 ntBASIC5.82□□□□□ -1.48
CD48P09326 AC122688.1-201ENST00000541494 223 ntBASIC5.82□□□□□ -1.48
CD48P09326 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.82□□□□□ -1.48
CD48P09326 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.82□□□□□ -1.48
CD48P09326 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.82□□□□□ -1.48
CD48P09326 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.82□□□□□ -1.48
CD48P09326 AC079315.1-201ENST00000602952 623 ntBASIC5.82□□□□□ -1.48
CD48P09326 AL118556.2-201ENST00000614375 824 ntBASIC5.82□□□□□ -1.48
CD48P09326 AC005618.4-201ENST00000625053 554 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms