Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC008629.2-201ENST00000503783 483 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.22□□□□□ -1.57
SPTA1P02549 OR56A7P-201ENST00000524865 941 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.22□□□□□ -1.57
SPTA1P02549 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.22□□□□□ -1.57
SPTA1P02549 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.22□□□□□ -1.57
SPTA1P02549 AC015818.6-201ENST00000584274 634 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 AC024255.1-201ENST00000614376 102 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.21□□□□□ -1.57
SPTA1P02549 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
SPTA1P02549 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.21□□□□□ -1.57
SPTA1P02549 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SPTA1P02549 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SPTA1P02549 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SPTA1P02549 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SPTA1P02549 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SPTA1P02549 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SPTA1P02549 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SPTA1P02549 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.21□□□□□ -1.58
SPTA1P02549 AC016583.1-201ENST00000624221 2431 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPTA1P02549 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPTA1P02549 AC068538.1-201ENST00000376856 336 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 RBMY2QP-201ENST00000429799 1147 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 RPL7L1P9-201ENST00000431298 745 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.21□□□□□ -1.58
SPTA1P02549 AP000547.1-201ENST00000454360 617 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC004129.2-201ENST00000457229 287 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.21□□□□□ -1.58
SPTA1P02549 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.21□□□□□ -1.58
SPTA1P02549 OR5AZ1P-201ENST00000527448 943 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 OR4A40P-201ENST00000533878 948 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.21□□□□□ -1.58
SPTA1P02549 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.21□□□□□ -1.58
SPTA1P02549 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SPTA1P02549 MIR8080-201ENST00000622224 89 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC5.21□□□□□ -1.58
SPTA1P02549 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SPTA1P02549 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPTA1P02549 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.21□□□□□ -1.58
SPTA1P02549 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 RNA5SP305-201ENST00000362665 119 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 RNA5SP515-201ENST00000364570 118 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPTA1P02549 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.21□□□□□ -1.58
SPTA1P02549 AL138878.2-201ENST00000440581 1241 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC234781.3-201ENST00000452540 973 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.21□□□□□ -1.58
SPTA1P02549 AC034205.1-201ENST00000520621 638 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.21□□□□□ -1.58
SPTA1P02549 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.21□□□□□ -1.58
SPTA1P02549 SS18L2P2-201ENST00000583960 235 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC104687.2-201ENST00000604442 342 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC092653.1-201ENST00000608509 531 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 AC087385.3-201ENST00000620477 187 ntBASIC5.21□□□□□ -1.58
SPTA1P02549 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SPTA1P02549 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SPTA1P02549 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.2□□□□□ -1.58
SPTA1P02549 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SPTA1P02549 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
SPTA1P02549 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.2□□□□□ -1.58
SPTA1P02549 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.2□□□□□ -1.58
SPTA1P02549 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.2□□□□□ -1.58
SPTA1P02549 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SPTA1P02549 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SPTA1P02549 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SPTA1P02549 AC011933.2-201ENST00000578539 2790 ntBASIC5.2□□□□□ -1.58
SPTA1P02549 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPTA1P02549 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.2□□□□□ -1.58
SPTA1P02549 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 CHMP1B2P-201ENST00000399581 597 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 MYL6P5-201ENST00000412707 459 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 COX6B1P1-201ENST00000415962 213 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.19□□□□□ -1.58
SPTA1P02549 RN7SL205P-201ENST00000490174 284 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 AC090638.1-201ENST00000498296 909 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 RPEP1-201ENST00000504507 658 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.19□□□□□ -1.58
SPTA1P02549 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SPTA1P02549 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.19□□□□□ -1.58
SPTA1P02549 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SPTA1P02549 RN7SL52P-201ENST00000584271 284 ntBASIC5.19□□□□□ -1.58
SPTA1P02549 AC007204.2-201ENST00000615022 616 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms