Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC119403.2-201ENST00000590960 598 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AL451049.1-201ENST00000608672 497 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AL354950.1-201ENST00000614150 568 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 MIR6806-201ENST00000622141 64 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PDLIM1O00151 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM1O00151 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM1O00151 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC011447.7-201ENST00000624228 1590 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM1O00151 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM1O00151 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM1O00151 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM1O00151 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 BMS1P3-201ENST00000372011 932 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 RBBP4P5-201ENST00000398583 1266 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 RNU2-18P-201ENST00000411224 162 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 RN7SKP108-201ENST00000411367 328 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 AC012519.1-201ENST00000424588 610 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC009784.1-201ENST00000426484 460 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.54□□□□□ -1.52
PDLIM1O00151 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
PDLIM1O00151 EEF1B2P3-201ENST00000447718 678 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 HMGN1P17-201ENST00000513734 295 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC004232.2-201ENST00000574245 821 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.54□□□□□ -1.52
PDLIM1O00151 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM1O00151 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AL513327.3-201ENST00000602618 469 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AL080312.2-201ENST00000613001 630 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 MIR6721-201ENST00000617181 87 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
PDLIM1O00151 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM1O00151 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM1O00151 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.54□□□□□ -1.52
PDLIM1O00151 ADAM5-202ENST00000399789 1942 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 AC000374.1-201ENST00000434698 1745 ntBASIC5.54□□□□□ -1.52
PDLIM1O00151 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
PDLIM1O00151 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM1O00151 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM1O00151 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM1O00151 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 OR9K1P-201ENST00000326513 941 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 RNA5SP346-201ENST00000363541 121 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 MIR1275-201ENST00000408770 80 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AC092865.3-201ENST00000425390 1026 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AC244033.1-201ENST00000426826 870 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 CRIP1P1-201ENST00000427567 185 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 AC010086.1-201ENST00000437359 1052 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AL590004.3-202ENST00000445883 451 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.53□□□□□ -1.52
PDLIM1O00151 AL133351.3-201ENST00000454998 193 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AL603882.1-201ENST00000463059 681 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 RN7SL649P-201ENST00000496974 275 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AC095052.1-201ENST00000509955 863 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 SNX18P25-201ENST00000510539 758 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 RNA5SP441-201ENST00000516809 88 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms