Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 AF287957.1-201ENST00000607368 1595 ntBASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DRB4X5D2U9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 RPS12P17-201ENST00000438591 377 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 VN1R110P-201ENST00000438988 971 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 EIF5AP4-201ENST00000441206 465 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC015983.1-201ENST00000441577 373 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 CST12P-201ENST00000457644 362 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC006539.1-201ENST00000481419 501 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 COX6B1P2-201ENST00000489624 230 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 RNA5SP473-201ENST00000516402 125 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC078899.1-201ENST00000521432 1185 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC079905.1-201ENST00000549280 475 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC024884.1-201ENST00000620583 399 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC025262.3-201ENST00000623666 360 ntBASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DRB4X5D2U9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DRB4X5D2U9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DRB4X5D2U9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DRB4X5D2U9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 IFIT1P1-201ENST00000400497 1449 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 PDZK1P1-202ENST00000425209 1350 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 RNA5SP433-201ENST00000364491 114 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC004386.1-201ENST00000393214 761 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 VN1R12P-201ENST00000403778 876 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SKP279-201ENST00000411383 298 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 GPS2P1-201ENST00000411761 986 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC019205.1-201ENST00000421830 730 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 VN1R21P-201ENST00000426703 765 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CRIP1P1-201ENST00000427567 185 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 FRG2FP-204ENST00000453982 852 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 AL157777.1-201ENST00000468100 304 ntBASIC4.33□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SL741P-201ENST00000482473 289 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms