Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC034229.2-201ENST00000566945 2508 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RNU6-636P-201ENST00000384598 107 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC007068.1-201ENST00000396690 844 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RPL5P20-201ENST00000403848 896 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RNU4-22P-201ENST00000411058 166 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 MTND4LP17-201ENST00000414607 293 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL449283.1-202ENST00000418249 604 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL513175.2-201ENST00000422071 443 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 GAPDHP19-201ENST00000431768 1005 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 GTF2IP3-201ENST00000433887 494 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RPEP4-201ENST00000437636 602 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL356121.1-201ENST00000442911 156 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 MTND2P28-201ENST00000457540 1044 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RPSAP39-201ENST00000467439 883 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC005017.1-201ENST00000482002 490 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RPL19P11-201ENST00000495944 589 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 SNORA58-201ENST00000505219 137 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 IGLV3-6-201ENST00000523937 250 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL049830.4-201ENST00000555149 351 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 Z99497.2-201ENST00000603634 310 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AL390877.1-201ENST00000605704 214 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC098679.4-201ENST00000624241 654 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 OR7A1P-202ENST00000641542 1158 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AC217777.1-201ENST00000570034 1471 ntBASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.76□□□□□ -1.33
PPARGC1AQ9UBK2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 RNU5B-1-201ENST00000363286 116 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 SNORD116-1-201ENST00000384335 95 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AL034417.1-201ENST00000399343 800 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 RPL7P27-201ENST00000403775 720 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 RN7SKP182-201ENST00000410772 298 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 MRPS21P5-201ENST00000417885 231 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 SETP9-201ENST00000423837 832 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 PNRC2P1-201ENST00000423940 420 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AL139415.1-201ENST00000424862 352 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 AC093719.1-201ENST00000480427 441 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 RPL5P14-201ENST00000494197 878 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 MTND6P8-201ENST00000503471 522 ntBASIC6.75□□□□□ -1.33
PPARGC1AQ9UBK2 NACAP5-201ENST00000509863 636 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms