Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AC126615.2-201ENST00000553003 515 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AC022467.1-201ENST00000614738 749 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AL390318.1-201ENST00000624564 687 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AC007683.2-201ENST00000624681 714 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 SRRM1P3-201ENST00000426911 2678 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 MTCO1P46-201ENST00000451639 1491 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 YES1P1-201ENST00000418510 1628 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AL449283.1-201ENST00000602631 3403 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 LINC02019-201ENST00000608605 2060 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 AL161756.3-201ENST00000641216 2071 ntBASIC5.11□□□□□ -1.59
CLCF1Q9UBD9 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AP004607.3-201ENST00000530354 3915 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 RNA5SP132-201ENST00000364725 118 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 RNA5SP131-201ENST00000365452 119 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 MIR130A-201ENST00000385274 89 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 RMRPP5-201ENST00000411156 267 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 NENFP1-201ENST00000419476 466 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 TNPO1P1-201ENST00000423641 1138 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AL136455.1-201ENST00000441083 1240 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC079080.1-201ENST00000479841 822 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC087672.1-201ENST00000479876 766 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 RPL7L1P4-201ENST00000513004 707 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 RNU6-964P-201ENST00000516524 69 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 NRBF2P4-201ENST00000520874 850 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LINC01963-201ENST00000562038 3148 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC005725.1-201ENST00000577346 2607 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 MIR1273E-201ENST00000581165 102 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 MIR3176-201ENST00000582210 90 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AC008115.3-201ENST00000614874 549 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AL034546.1-201ENST00000623740 3693 ntBASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCF1Q9UBD9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 CIR1P2-201ENST00000514821 1342 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 RPL23AP17-201ENST00000401064 499 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 OR3A2-201ENST00000408891 1076 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 OR6E1P-201ENST00000414424 923 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 RPL34P27-201ENST00000428810 349 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms