Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC005225.5-201ENST00000623547 2225 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 RNA5SP435-201ENST00000364044 108 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 RNU6-532P-201ENST00000384318 107 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 SNORA11B-201ENST00000408175 129 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC010385.1-201ENST00000412374 256 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 CYCSP52-201ENST00000422857 310 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AL354707.3-201ENST00000427308 331 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 IGLV3-4-201ENST00000432300 244 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC112492.2-201ENST00000432774 1030 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AL035458.1-201ENST00000433096 585 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC094019.1-201ENST00000434678 472 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 RPL12P31-201ENST00000478433 450 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 RPL21P47-201ENST00000483696 477 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 RN7SL714P-201ENST00000487050 298 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 RPL12P30-201ENST00000488389 499 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 PPM1AP1-201ENST00000502740 1135 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 OR5H3P-201ENST00000502817 919 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 KHDC1P1-201ENST00000511053 508 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 BUD31P1-201ENST00000521828 359 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 TRIM51DP-201ENST00000529746 596 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 GLRXP2-201ENST00000555594 321 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC122134.1-201ENST00000565664 1104 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AF129408.1-201ENST00000608767 431 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AL359513.1-201ENST00000614364 557 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC073488.6-201ENST00000632293 754 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC007842.1-201ENST00000597336 2039 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 AC068870.3-201ENST00000625077 2536 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.85□□□□□ -1.47
LRFN1Q9P244 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
LRFN1Q9P244 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LRFN1Q9P244 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC007342.5-201ENST00000571340 2142 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 NXF4-202ENST00000416098 1465 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 AC010624.4-201ENST00000597606 1351 ntBASIC5.84□□□□□ -1.47
LRFN1Q9P244 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRFN1Q9P244 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.84□□□□□ -1.47
LRFN1Q9P244 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms