Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ATP5LP2-201ENST00000440646 311 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AL596266.1-201ENST00000448132 400 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 KF459542.1-201ENST00000450908 553 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AZGP1P2-201ENST00000454506 345 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 CST12P-201ENST00000457644 362 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC009120.1-201ENST00000493458 473 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC091874.2-201ENST00000505889 720 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC018797.1-201ENST00000510791 255 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC021678.3-201ENST00000517893 476 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC121758.1-202ENST00000556917 658 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AL022394.1-201ENST00000606979 292 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 Z95327.3-201ENST00000610385 572 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC090607.5-201ENST00000615692 224 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AP000473.2-201ENST00000602659 1537 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 OR4G1P-202ENST00000641173 1788 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AC004158.1-201ENST00000564508 4319 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC144833.1-201ENST00000567953 4089 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 NACAP7-201ENST00000407371 609 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RPS6P23-201ENST00000413224 722 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 NENFP1-201ENST00000419476 466 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC126120.1-201ENST00000431082 470 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RN7SL188P-201ENST00000469842 285 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RPSAP37-201ENST00000470913 821 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AL122020.1-201ENST00000472287 459 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC098818.1-201ENST00000478593 252 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 RPS26P24-201ENST00000497656 331 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 DUTP7-201ENST00000507982 486 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC021106.1-201ENST00000509020 1058 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 LDHAP1-201ENST00000509421 992 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC021733.2-201ENST00000518830 497 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AP003396.4-201ENST00000527574 265 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 HMGN2P36-201ENST00000529541 409 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 MIR4502-201ENST00000580432 81 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 MIR7853-201ENST00000584820 132 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC005828.7-201ENST00000607331 556 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
VAPAQ9P0L0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VAPAQ9P0L0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms