Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ATP5HP3-201ENST00000396994 486 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PKMP3-201ENST00000405497 715 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RANP6-201ENST00000413691 644 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RPL36P1-201ENST00000419720 225 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 GRPEL2P2-201ENST00000421856 670 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL009174.1-201ENST00000426577 416 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL512649.1-201ENST00000428997 581 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RPS4XP4-201ENST00000443195 763 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RPL10P6-201ENST00000457497 318 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RN7SL12P-201ENST00000473849 290 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC107398.1-201ENST00000486904 505 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL157687.1-201ENST00000554853 619 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 CYP2C60P-201ENST00000566088 139 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 MARK3P1-201ENST00000604796 643 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 COX6CP4-201ENST00000605798 228 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC116312.1-201ENST00000606841 314 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL590282.1-201ENST00000610379 1136 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL359535.1-201ENST00000612100 1087 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL355974.1-201ENST00000618896 1708 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AC104083.1-201ENST00000569449 2615 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 AL391261.1-201ENST00000555712 1479 ntBASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CUEDC1Q9NWM3 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 XRCC6P2-201ENST00000457831 1822 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC145138.1-201ENST00000512908 2851 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RNU6-353P-201ENST00000364266 108 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RNU4-7P-201ENST00000364758 141 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MIR106B-201ENST00000385301 82 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MT-TP-201ENST00000387461 68 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 MTCO3P40-201ENST00000392516 676 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 NRBF2P2-201ENST00000413087 861 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 TAF13P2-201ENST00000416876 286 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC011753.4-201ENST00000417974 311 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 NCOR1P3-201ENST00000420479 303 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC007742.1-201ENST00000425789 329 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 HSPE1P16-201ENST00000426640 348 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AC104843.2-201ENST00000427666 297 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 RPL31P54-201ENST00000429803 370 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 DEFA9P-201ENST00000433042 285 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 ELOCP26-201ENST00000436067 329 ntBASIC7.53□□□□□ -1.2
CUEDC1Q9NWM3 AL512593.1-201ENST00000444758 779 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms