Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 ATP5A1P3-201ENST00000573189 1507 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL355974.1-201ENST00000618896 1708 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 RPL7P26-201ENST00000333817 754 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 Y_RNA.193-201ENST00000363979 102 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 RN7SKP6-201ENST00000364795 319 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 CENPW-201ENST00000368325 528 ntTSL 3 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 RNU6-1297P-201ENST00000384415 104 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 MT-TG-201ENST00000387429 68 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 RNU6-1106P-201ENST00000390845 107 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 GAPDHP42-201ENST00000406848 981 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 RN7SKP266-201ENST00000410232 287 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 MTCYBP9-201ENST00000431021 303 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 SNRPEP7-201ENST00000438350 220 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL590609.1-201ENST00000442164 328 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL731563.1-201ENST00000442202 214 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 SUMO1P2-201ENST00000452524 304 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 CECR9-201ENST00000453421 199 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 PPP1R2P5-201ENST00000457256 603 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 ENPP7P2-201ENST00000462675 943 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 ACTG1P20-201ENST00000486001 468 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 RNU6-559P-201ENST00000516151 98 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 Y_RNA.718-201ENST00000517110 102 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC022861.1-201ENST00000522981 663 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 NF1P12-201ENST00000549593 583 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AL117187.1-201ENST00000555482 181 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 DPPA3P2-202ENST00000557188 1219 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AP001330.4-201ENST00000604350 154 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC048344.3-201ENST00000605512 251 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 BX323046.1-201ENST00000610145 535 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 AC026634.1-201ENST00000634369 198 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 MTND4LP32-201ENST00000636111 270 ntBASIC7.59□□□□□ -1.19
USB1Q9BQ65 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USB1Q9BQ65 TBXAS1-209ENST00000455353 1435 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
USB1Q9BQ65 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
USB1Q9BQ65 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
USB1Q9BQ65 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
USB1Q9BQ65 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 RPL4P3-201ENST00000428881 1311 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 OR11H5P-202ENST00000641612 1325 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USB1Q9BQ65 AC092447.10-201ENST00000620607 1652 ntBASIC7.58□□□□□ -1.2
USB1Q9BQ65 AL353132.1-201ENST00000415260 2043 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms