Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PKP4Q99569 OR6C72P-201ENST00000451403 892 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.75□□□□□ -1.49
PKP4Q99569 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.75□□□□□ -1.49
PKP4Q99569 AC117394.1-201ENST00000477323 567 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 RPL38P3-201ENST00000484463 213 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 COL6A4P2-205ENST00000509855 506 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 MIR2117-201ENST00000516780 80 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 AC007346.2-201ENST00000564816 892 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 GARSP1-201ENST00000570895 719 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 TXNP4-201ENST00000575018 310 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 MIR4776-2-201ENST00000580204 80 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 AC134669.1-201ENST00000581275 672 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 AL136131.3-201ENST00000607600 188 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.75□□□□□ -1.49
PKP4Q99569 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 AL591135.1-201ENST00000401578 5914 ntBASIC5.75□□□□□ -1.49
PKP4Q99569 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.75□□□□□ -1.49
PKP4Q99569 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PKP4Q99569 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PKP4Q99569 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PKP4Q99569 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PKP4Q99569 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.75□□□□□ -1.49
PKP4Q99569 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PKP4Q99569 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 AL359955.1-201ENST00000455242 3275 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC232271.1-201ENST00000602455 2715 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 RN7SKP128-201ENST00000364270 303 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PKP4Q99569 CXADRP1-201ENST00000398098 1095 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 OR7E156P-201ENST00000400303 464 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.74□□□□□ -1.49
PKP4Q99569 RAB9AP4-201ENST00000415230 609 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC013410.2-201ENST00000422627 201 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 ELOCP6-201ENST00000429066 328 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 USP24P1-201ENST00000433802 779 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 TUBB4BP6-201ENST00000437576 479 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 VN1R110P-201ENST00000438988 971 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 ELOCP12-201ENST00000458706 328 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 MTND3P3-201ENST00000505004 126 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 OR5H7P-201ENST00000514084 930 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 WBP1LP3-201ENST00000523033 208 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.74□□□□□ -1.49
PKP4Q99569 AC067805.1-201ENST00000559344 470 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.74□□□□□ -1.49
PKP4Q99569 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 MIR6793-201ENST00000612376 63 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 MIR6071-201ENST00000616741 78 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 CXADRP3-202ENST00000617265 1100 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AL445670.1-201ENST00000618889 801 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 AC024884.1-201ENST00000620583 399 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC015660.5-201ENST00000623238 564 ntBASIC5.74□□□□□ -1.49
PKP4Q99569 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.74□□□□□ -1.49
PKP4Q99569 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PKP4Q99569 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PKP4Q99569 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKP4Q99569 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms