Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 OR56A4-201ENST00000330728 1209 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 RNU6-1251P-201ENST00000364502 107 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 SNORA26.8-201ENST00000391306 124 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AL590762.1-201ENST00000391782 432 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 RN7SKP263-201ENST00000411194 309 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 USP9YP35-201ENST00000435696 412 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AL121601.2-201ENST00000438019 707 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AL606662.1-201ENST00000445763 553 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 RPS18P1-201ENST00000447840 458 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 RPL7L1P3-201ENST00000455249 689 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC027673.1-201ENST00000456245 405 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AKR1D1P1-201ENST00000457236 936 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 RN7SL393P-201ENST00000463588 296 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 CBX3P3-201ENST00000508108 532 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 GUSBP9-201ENST00000510138 584 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC093664.1-201ENST00000511779 289 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AP001804.1-201ENST00000526868 919 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AP005205.1-201ENST00000563503 508 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 MIR4999-201ENST00000585029 91 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC011500.1-201ENST00000601963 469 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 NDUFB9P1-201ENST00000604683 510 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC008443.7-201ENST00000622195 246 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC068213.1-201ENST00000625124 226 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 SNORA16A-202ENST00000628458 135 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AL359263.1-201ENST00000441188 2796 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 AC122713.2-201ENST00000624942 3335 ntBASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CCDC85AQ96PX6 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AL451064.2-201ENST00000623514 1654 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AL449283.1-201ENST00000602631 3403 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 SNORD65-201ENST00000391079 73 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC245036.1-201ENST00000391727 309 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 OR4K6P-201ENST00000416478 897 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 MOB1AP1-201ENST00000430903 535 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC009263.1-201ENST00000441193 1239 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC234771.2-201ENST00000445718 597 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 UBE2V1P7-201ENST00000446395 340 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 RPL5P32-201ENST00000454085 879 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC236972.4-201ENST00000458091 963 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 RPS7P10-201ENST00000464254 603 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC126182.1-201ENST00000478134 357 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 RN7SL187P-201ENST00000495587 303 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AC079140.3-201ENST00000511111 550 ntBASIC8.5□□□□□ -1.05
CCDC85AQ96PX6 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms