Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC7Q96M83 AC089998.1-201ENST00000548575 3141 ntBASIC7.88□□□□□ -1.15
CCDC7Q96M83 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC7Q96M83 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CCDC7Q96M83 PWAR1-201ENST00000624188 2414 ntBASIC7.88□□□□□ -1.15
CCDC7Q96M83 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC7Q96M83 AC007342.5-201ENST00000571340 2142 ntBASIC7.88□□□□□ -1.15
CCDC7Q96M83 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC7Q96M83 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC7Q96M83 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC7Q96M83 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC7Q96M83 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC7Q96M83 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC7Q96M83 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC7Q96M83 AL121886.1-201ENST00000358609 435 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 TNPO1P1-201ENST00000423641 1138 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 AC099670.2-201ENST00000435130 321 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 GAPDHP58-201ENST00000438477 1006 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 UBA52P7-201ENST00000486088 380 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 AC090058.1-201ENST00000498788 435 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 RN7SKP253-201ENST00000516424 309 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 HMGB1P42-201ENST00000532126 553 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC7Q96M83 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC7Q96M83 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 AC004076.2-201ENST00000620532 3323 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 UGT2B24P-201ENST00000514441 1597 ntBASIC7.87□□□□□ -1.15
CCDC7Q96M83 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC7Q96M83 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC7Q96M83 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC7Q96M83 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 SNORA70-201ENST00000384436 135 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 RN7SKP59-201ENST00000410520 314 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 MEMO1P4-201ENST00000453590 386 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AL049872.1-201ENST00000556323 322 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 MIR4311-201ENST00000580794 100 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 MIR4420-201ENST00000583944 77 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 SAMMSON-227ENST00000642114 1199 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 C4BPAP1-201ENST00000415474 1893 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 CR383656.5-201ENST00000547616 1340 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC7Q96M83 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
CCDC7Q96M83 AC073429.2-201ENST00000569694 1444 ntBASIC7.86□□□□□ -1.15
CCDC7Q96M83 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC7Q96M83 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC7Q96M83 LINC01963-201ENST00000562038 3148 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 RNA5SP131-201ENST00000365452 119 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 OR10T1P-201ENST00000424327 947 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 FMO7P-201ENST00000436045 768 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC009237.13-201ENST00000603193 276 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 AL136295.6-201ENST00000610486 658 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC114774.1-201ENST00000507410 1770 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC7Q96M83 AC018809.2-201ENST00000602436 3823 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC7Q96M83 SRRM1P3-201ENST00000426911 2678 ntBASIC7.85□□□□□ -1.15
CCDC7Q96M83 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC7Q96M83 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC7Q96M83 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC7Q96M83 PABPC1P6-201ENST00000445594 1829 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms