Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RBMY2TP-201ENST00000451162 947 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 CST12P-201ENST00000457644 362 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 RPS17P15-201ENST00000475609 349 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 CYCSP38-201ENST00000559840 322 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC117490.2-201ENST00000610042 594 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 MIR6889-201ENST00000613185 59 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 RNA5SP439-201ENST00000617595 124 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC092451.3-201ENST00000625067 1343 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 LYARP1-201ENST00000436977 1501 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AP004607.3-201ENST00000530354 3915 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 RNA5SP431-201ENST00000410312 120 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 RN7SKP29-201ENST00000410957 272 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 ARAFP1-201ENST00000422172 605 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 RCC2P2-201ENST00000422174 918 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC242426.1-201ENST00000435270 960 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 OR7E116P-201ENST00000448529 957 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC104339.1-201ENST00000465478 348 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 SEPT7P6-201ENST00000469999 1143 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CR383656.1-201ENST00000484916 377 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 OR11I1P-201ENST00000486033 954 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 RN7SL57P-201ENST00000493687 290 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 RNU6-319P-201ENST00000516025 108 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC027026.1-201ENST00000532323 742 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC015712.7-201ENST00000615211 635 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL590410.1-201ENST00000617925 333 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC048341.3-201ENST00000619323 491 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL035661.1-201ENST00000620459 1144 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC024884.1-201ENST00000620583 399 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AL596275.2-207ENST00000641188 675 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AC138907.8-201ENST00000623981 2256 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 AP001284.1-201ENST00000528393 2118 ntBASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM5Q96HC4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 AC123769.1-201ENST00000530992 3192 ntBASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM5Q96HC4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms