Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 BTG1P1-201ENST00000540396 508 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC073333.2-201ENST00000603589 769 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC012676.3-201ENST00000614983 479 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AL355974.3-201ENST00000617383 467 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AF117829.2-201ENST00000619538 361 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC099654.15-201ENST00000639802 509 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC010325.3-201ENST00000641084 394 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 MT-TP-201ENST00000387461 68 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL139805.1-201ENST00000407837 289 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 MYL6P5-201ENST00000412707 459 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 MTND2P12-201ENST00000417560 1252 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LINC00328-2P-201ENST00000436585 219 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL035551.1-201ENST00000446931 348 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 NPM1P39-201ENST00000449818 867 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 SDC4P-201ENST00000453285 601 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 RARRES2P3-201ENST00000457739 473 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC037198.2-201ENST00000478845 733 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC044810.1-201ENST00000480271 711 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 FTH1P11-201ENST00000517577 551 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC104997.1-201ENST00000519761 717 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 RN7SL230P-201ENST00000580835 303 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 SNX18P12-201ENST00000624821 759 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 EIF3EP1-201ENST00000433978 1316 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 AC130304.1-201ENST00000622942 2385 ntBASIC5.41□□□□□ -1.54
PTP4A1Q93096 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTP4A1Q93096 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PTP4A1Q93096 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTP4A1Q93096 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms