Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC099654.11-201ENST00000638857 294 ntBASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 AC002525.1-201ENST00000624392 1622 ntBASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CRLF3Q8IUI8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AL132656.3-201ENST00000606384 1595 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 RNA5SP122-201ENST00000384457 108 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 IPPKP1-201ENST00000422501 768 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC009784.1-201ENST00000426484 460 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 LINC02210-201ENST00000444561 288 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 CBX1P2-201ENST00000453841 458 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 CST12P-201ENST00000457644 362 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 RPS7P6-201ENST00000485777 579 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 OR4A17P-201ENST00000526032 904 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AP003396.4-201ENST00000527574 265 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 NANOGNBP2-201ENST00000544753 553 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC007956.1-201ENST00000555623 542 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC145423.1-201ENST00000605712 336 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC117409.1-201ENST00000470499 1310 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 AC099654.3-201ENST00000447087 1546 ntBASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CRLF3Q8IUI8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 RN7SKP81-201ENST00000365603 331 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 SUGT1P2-201ENST00000379452 992 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 U3.28-201ENST00000391249 210 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 LYPLA1P3-201ENST00000402650 695 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 HMGN1P20-201ENST00000411849 300 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 HLA-DPA3-207ENST00000454398 229 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC023245.1-201ENST00000468501 517 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC006499.4-201ENST00000510947 694 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 OR5H7P-201ENST00000514084 930 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 RPA2P1-201ENST00000556557 721 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC090286.3-201ENST00000573133 187 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC245014.3-201ENST00000618589 347 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 FO681491.1-202ENST00000623392 737 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 AC129778.1-202ENST00000623812 261 ntBASIC5.67□□□□□ -1.5
CRLF3Q8IUI8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms