Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 LINC02019-201ENST00000608605 2060 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 RNU105B-201ENST00000364478 208 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 RNU6-609P-201ENST00000365459 107 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 YWHAZP4-201ENST00000392459 708 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 ARSFP1-201ENST00000398758 477 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AL035405.1-201ENST00000400795 710 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 MYL6P5-201ENST00000412707 459 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC245096.1-201ENST00000413104 546 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 MARK2P12-201ENST00000420129 585 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 UBE2D3P3-201ENST00000426992 425 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 MTND2P21-201ENST00000436242 1042 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AL645936.1-201ENST00000441979 518 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 FCF1P6-201ENST00000456841 595 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 STRADBP1-201ENST00000478954 1281 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC018639.1-201ENST00000492994 442 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC122714.1-201ENST00000502510 459 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 RNU6-415P-201ENST00000516252 97 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 SNORA74.1-201ENST00000516320 180 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC093510.2-201ENST00000562820 896 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 MIR212-201ENST00000586026 110 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 BNIP3P40-201ENST00000596017 556 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AL589765.6-201ENST00000601909 549 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 AP001823.1-201ENST00000604056 1003 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 RPL12P48-201ENST00000605620 304 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC012213.4-201ENST00000606457 354 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 AC023510.2-201ENST00000622162 746 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 HSPA8P19-201ENST00000505359 1517 ntBASIC5.38□□□□□ -1.55
SHFQ7M4L6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHFQ7M4L6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHFQ7M4L6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHFQ7M4L6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHFQ7M4L6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHFQ7M4L6 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHFQ7M4L6 RPL11P4-201ENST00000332269 436 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHFQ7M4L6 RNU6-925P-201ENST00000384629 104 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 AC007068.1-201ENST00000396690 844 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 ADAM24P-201ENST00000398655 2101 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 PRELID1P1-201ENST00000403549 660 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 AL359885.1-201ENST00000415786 903 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.37□□□□□ -1.55
SHFQ7M4L6 RPS15AP30-201ENST00000420976 390 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.37□□□□□ -1.55
SHFQ7M4L6 RPS26P4-201ENST00000431743 355 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms