Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AP003049.1-201ENST00000529418 457 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC006530.1-201ENST00000555980 571 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL163952.1-202ENST00000569625 600 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC009779.8-202ENST00000607990 932 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC112503.2-201ENST00000609005 552 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 MIR6780B-201ENST00000610307 79 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL139099.4-201ENST00000614802 114 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC245014.3-201ENST00000618589 347 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC022400.9-201ENST00000623633 273 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL596275.2-207ENST00000641188 675 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AP001157.1-201ENST00000550837 2339 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 HSPA8P19-201ENST00000505359 1517 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AP004607.3-201ENST00000530354 3915 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AL355834.1-201ENST00000556602 3965 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC027088.4-201ENST00000611559 1947 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC093297.3-201ENST00000607056 2517 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC015799.1-201ENST00000622996 3122 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AL592494.2-201ENST00000425455 1548 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 RNA5SP500-201ENST00000364486 119 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 MIR620-201ENST00000385232 95 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 MTATP6P31-201ENST00000406985 692 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 RN7SKP29-201ENST00000410957 272 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 RN7SKP279-201ENST00000411383 298 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AK3P5-201ENST00000432033 519 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC242426.1-201ENST00000435270 960 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 MTND2P25-201ENST00000449028 610 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC118758.1-202ENST00000454719 225 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 TPT1P8-201ENST00000510120 555 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC026407.1-201ENST00000518369 204 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC079905.1-201ENST00000549280 475 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC007956.1-201ENST00000555623 542 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC026826.3-201ENST00000561747 158 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 LINC00556-201ENST00000569603 412 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AL050303.3-201ENST00000613704 284 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 CASC19-238ENST00000641523 1558 ntBASIC5.76□□□□□ -1.49
ZNF549Q6P9A3 AC025470.1-201ENST00000510053 2032 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms