Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 AC087683.1-201ENST00000591187 441 ntBASIC7.29□□□□□ -1.24
RNF43Q68DV7 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 AL359091.2-201ENST00000609303 556 ntBASIC7.29□□□□□ -1.24
RNF43Q68DV7 AC008498.1-201ENST00000613012 531 ntBASIC7.29□□□□□ -1.24
RNF43Q68DV7 AC026108.1-201ENST00000635444 547 ntBASIC7.29□□□□□ -1.24
RNF43Q68DV7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 AC062029.1-202ENST00000606164 3651 ntBASIC7.29□□□□□ -1.24
RNF43Q68DV7 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF43Q68DV7 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF43Q68DV7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RNF43Q68DV7 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RNF43Q68DV7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RNF43Q68DV7 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC090181.3-201ENST00000624777 1514 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 RPL12P13-201ENST00000310055 497 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC092634.1-201ENST00000366505 199 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 MIR548F1-201ENST00000408667 84 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 RN7SKP268-201ENST00000411107 316 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 NPM1P11-201ENST00000417106 855 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 TNPO1P1-201ENST00000423641 1138 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 BX119904.1-201ENST00000432026 348 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL031681.1-201ENST00000443304 400 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 WASF1P1-201ENST00000447560 1131 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC126182.1-201ENST00000478134 357 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC069304.1-201ENST00000491593 704 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 FCF1P3-201ENST00000496394 590 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC109458.1-201ENST00000508858 316 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC008885.2-201ENST00000509506 930 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 MINOS1P4-201ENST00000515470 318 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 DUXAP2-201ENST00000519198 589 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AP003033.2-201ENST00000528901 805 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 OR5BC1P-201ENST00000529327 739 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 RAB11AP2-201ENST00000545905 639 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC004217.3-201ENST00000551552 878 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 NPM1P47-201ENST00000560843 856 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 MIR4271-201ENST00000582451 67 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 PRELID3BP3-201ENST00000584963 545 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 RPS27AP19-201ENST00000597285 458 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC005034.4-201ENST00000603612 899 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC133552.5-201ENST00000604266 540 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC015849.2-201ENST00000605738 409 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC007684.1-201ENST00000609671 477 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC005840.5-201ENST00000619166 599 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC034229.6-201ENST00000623704 224 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC016717.3-201ENST00000624730 554 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL359697.1-201ENST00000624879 587 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 MTND1P37-201ENST00000636562 264 ntBASIC7.28□□□□□ -1.24
RNF43Q68DV7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF43Q68DV7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
RNF43Q68DV7 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms