Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
RHBDL3P58872 RN7SKP151-201ENST00000410230 316 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 NENFP1-201ENST00000419476 466 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.06□□□□□ -1.28
RHBDL3P58872 AC099677.3-201ENST00000427081 395 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 ZFAND6P1-201ENST00000434138 605 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 AC089999.1-201ENST00000460336 374 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 AC107015.1-201ENST00000466902 747 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 RPS26P39-201ENST00000469206 341 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 AC008945.1-201ENST00000505144 499 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 SCARNA21.2-201ENST00000516600 166 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.06□□□□□ -1.28
RHBDL3P58872 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.06□□□□□ -1.28
RHBDL3P58872 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.06□□□□□ -1.28
RHBDL3P58872 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.06□□□□□ -1.28
RHBDL3P58872 AC005520.3-201ENST00000602874 370 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 CYCSP1-201ENST00000604815 315 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 FAM27E4-201ENST00000605259 342 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 AC145423.1-201ENST00000605712 336 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 AC092159.4-201ENST00000624944 550 ntBASIC7.06□□□□□ -1.28
RHBDL3P58872 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.06□□□□□ -1.28
RHBDL3P58872 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
RHBDL3P58872 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RHBDL3P58872 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RHBDL3P58872 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RHBDL3P58872 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.05□□□□□ -1.28
RHBDL3P58872 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.05□□□□□ -1.28
RHBDL3P58872 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 CIR1P2-201ENST00000514821 1342 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RHBDL3P58872 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
RHBDL3P58872 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.05□□□□□ -1.28
RHBDL3P58872 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RHBDL3P58872 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 SNORA79B-201ENST00000410557 148 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
RHBDL3P58872 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 MTND5P8-201ENST00000449817 1083 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 YWHAEP1-201ENST00000453697 763 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.05□□□□□ -1.28
RHBDL3P58872 AL157777.1-201ENST00000468100 304 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 LARP7P4-201ENST00000481075 878 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.05□□□□□ -1.28
RHBDL3P58872 CYP4F27P-201ENST00000514557 494 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 RNU6-889P-201ENST00000517189 103 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 AC125612.1-201ENST00000547580 377 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.05□□□□□ -1.28
RHBDL3P58872 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.05□□□□□ -1.28
RHBDL3P58872 TXNP4-201ENST00000575018 310 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 AP001496.3-201ENST00000580230 913 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 MIR3176-201ENST00000582210 90 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.05□□□□□ -1.28
RHBDL3P58872 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 MTCO2P22-201ENST00000603246 681 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 AC005021.1-201ENST00000608730 355 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 RN7SL544P-201ENST00000617232 284 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 RN7SL763P-201ENST00000620922 284 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.05□□□□□ -1.28
RHBDL3P58872 AL596275.2-208ENST00000641192 594 ntBASIC7.05□□□□□ -1.28
RHBDL3P58872 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.05□□□□□ -1.28
RHBDL3P58872 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RHBDL3P58872 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.04□□□□□ -1.28
RHBDL3P58872 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RHBDL3P58872 AL034546.1-201ENST00000623740 3693 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RHBDL3P58872 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RHBDL3P58872 WBP11P1-201ENST00000562560 1931 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RHBDL3P58872 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RHBDL3P58872 TMA16P2-201ENST00000413187 601 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 REREP1Y-201ENST00000422655 198 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AC007568.1-201ENST00000422912 471 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AL662874.1-201ENST00000426065 230 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AL121776.1-201ENST00000429337 372 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC002504.1-201ENST00000438281 691 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 REREP2Y-201ENST00000439103 200 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms