Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC006530.1-201ENST00000555980 571 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC009268.1-201ENST00000561352 1203 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AL731537.2-201ENST00000561565 951 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 ZNF322P1-201ENST00000568013 1209 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.81□□□□□ -1.48
CLCNKAP51800 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC092474.3-201ENST00000603022 568 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AC022387.2-201ENST00000604050 448 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AL139099.4-201ENST00000614802 114 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 SNX18P12-201ENST00000624821 759 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 MSL3P1-202ENST00000440028 1468 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 PDZK1P1-202ENST00000425209 1350 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 RNF19BPY-201ENST00000458209 1550 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 AC005725.1-201ENST00000577346 2607 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.8□□□□□ -1.48
CLCNKAP51800 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CLCNKAP51800 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CLCNKAP51800 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 RNU11-201ENST00000387069 134 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.8□□□□□ -1.48
CLCNKAP51800 CDY17P-201ENST00000414121 1282 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 BX323845.3-201ENST00000428215 527 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 MAPRE1P3-201ENST00000435438 796 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AL445665.1-202ENST00000452436 324 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.8□□□□□ -1.48
CLCNKAP51800 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 RN7SL57P-201ENST00000493687 290 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 PSMA2P2-201ENST00000504319 686 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AC079600.1-201ENST00000550326 297 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AC091078.2-201ENST00000557145 559 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AL360012.1-201ENST00000602813 131 ntBASIC5.8□□□□□ -1.48
CLCNKAP51800 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLCNKAP51800 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.8□□□□□ -1.48
CLCNKAP51800 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
CLCNKAP51800 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLCNKAP51800 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLCNKAP51800 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.79□□□□□ -1.48
CLCNKAP51800 AC087516.1-201ENST00000561236 2428 ntBASIC5.79□□□□□ -1.48
CLCNKAP51800 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.79□□□□□ -1.48
CLCNKAP51800 AC011503.2-201ENST00000594230 1500 ntBASIC5.79□□□□□ -1.48
CLCNKAP51800 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.79□□□□□ -1.48
CLCNKAP51800 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.79□□□□□ -1.48
CLCNKAP51800 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLCNKAP51800 AC007842.1-201ENST00000597336 2039 ntBASIC5.79□□□□□ -1.48
CLCNKAP51800 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.79□□□□□ -1.48
CLCNKAP51800 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
CLCNKAP51800 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
CLCNKAP51800 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 AC140134.1-201ENST00000511830 3544 ntBASIC5.79□□□□□ -1.48
CLCNKAP51800 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLCNKAP51800 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms