Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.86□□□□□ -1.47
BRCA2P51587 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.86□□□□□ -1.47
BRCA2P51587 RNA5SP43-201ENST00000516559 110 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.86□□□□□ -1.47
BRCA2P51587 AC093765.1-201ENST00000603758 881 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 AL137100.1-201ENST00000556703 1620 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.85□□□□□ -1.47
BRCA2P51587 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 RNU4-39P-201ENST00000362455 127 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 HMGB3P7-201ENST00000400214 611 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 RNA5SP392-201ENST00000516905 112 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 AC068831.4-201ENST00000556118 109 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.85□□□□□ -1.47
BRCA2P51587 AC093227.2-201ENST00000589357 285 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 AC020765.1-201ENST00000604296 328 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.85□□□□□ -1.47
BRCA2P51587 AC007996.1-201ENST00000620414 2821 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 HSPD1P7-201ENST00000447985 1686 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.85□□□□□ -1.47
BRCA2P51587 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 AC114774.1-201ENST00000507410 1770 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
BRCA2P51587 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
BRCA2P51587 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
BRCA2P51587 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.85□□□□□ -1.47
BRCA2P51587 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 PPIAP21-201ENST00000464473 501 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.85□□□□□ -1.47
BRCA2P51587 OR8G5-201ENST00000524943 1041 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 OR11H3P-201ENST00000554547 982 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.85□□□□□ -1.47
BRCA2P51587 MIR4298-201ENST00000584380 73 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.85□□□□□ -1.47
BRCA2P51587 AC135068.5-201ENST00000624197 983 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.85□□□□□ -1.47
BRCA2P51587 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRCA2P51587 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
BRCA2P51587 ITPK1-AS1-201ENST00000553639 4701 ntBASIC5.85□□□□□ -1.47
BRCA2P51587 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC5.84□□□□□ -1.47
BRCA2P51587 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
BRCA2P51587 OR4K15-201ENST00000305051 1216 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 TOMM22P4-201ENST00000511318 336 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 AC138701.1-201ENST00000524329 714 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 AP001880.2-201ENST00000538233 448 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.84□□□□□ -1.47
BRCA2P51587 AGGF1P7-201ENST00000562369 913 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 MIR132-201ENST00000591554 101 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 AL139041.1-201ENST00000605480 610 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
BRCA2P51587 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.47
BRCA2P51587 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
BRCA2P51587 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 RPS3AP23-201ENST00000401762 784 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.84□□□□□ -1.47
BRCA2P51587 AC006946.1-201ENST00000429106 328 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 AURKAPS2-201ENST00000454983 333 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 AC013356.1-201ENST00000489027 564 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 SAP18P1-201ENST00000512058 390 ntBASIC5.84□□□□□ -1.47
BRCA2P51587 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
BRCA2P51587 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.84□□□□□ -1.47
BRCA2P51587 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
BRCA2P51587 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
BRCA2P51587 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.84□□□□□ -1.47
BRCA2P51587 AL009179.1-201ENST00000406085 265 ntBASIC5.84□□□□□ -1.48
BRCA2P51587 RPL12P20-201ENST00000475538 479 ntBASIC5.84□□□□□ -1.48
BRCA2P51587 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.84□□□□□ -1.48
BRCA2P51587 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.84□□□□□ -1.48
BRCA2P51587 AL121873.1-201ENST00000616013 524 ntBASIC5.84□□□□□ -1.48
BRCA2P51587 AC004817.4-201ENST00000602396 3625 ntBASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms