Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AP002799.1-201ENST00000623552 423 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CXCL12P48061 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 AC130304.1-201ENST00000622942 2385 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.67□□□□□ -1.5
CXCL12P48061 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
CXCL12P48061 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 RN7SKP6-201ENST00000364795 319 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CXCL12P48061 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 RPS6P23-201ENST00000413224 722 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.67□□□□□ -1.5
CXCL12P48061 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.67□□□□□ -1.5
CXCL12P48061 FAM96AP1-201ENST00000430879 482 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 PSMD10P3-201ENST00000437000 448 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 LDHAP2-201ENST00000437325 985 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 AC109462.1-201ENST00000491087 368 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 SNRPCP2-201ENST00000504370 475 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 HSPE1P2-201ENST00000554777 306 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 OR1F2P-201ENST00000570470 933 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 MIR132-201ENST00000591554 101 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 AC004890.3-201ENST00000605566 1095 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.67□□□□□ -1.5
CXCL12P48061 HSPA8P18-201ENST00000439846 1928 ntBASIC5.67□□□□□ -1.5
CXCL12P48061 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.67□□□□□ -1.5
CXCL12P48061 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CXCL12P48061 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CXCL12P48061 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.67□□□□□ -1.5
CXCL12P48061 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CXCL12P48061 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CXCL12P48061 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AL731534.1-201ENST00000434711 269 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 AC073850.1-201ENST00000449243 255 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.66□□□□□ -1.5
CXCL12P48061 RPL5P12-201ENST00000477071 851 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 RPEP1-201ENST00000504507 658 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.66□□□□□ -1.5
CXCL12P48061 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.66□□□□□ -1.5
CXCL12P48061 CR383656.6-201ENST00000550518 394 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 BLZF2P-201ENST00000553776 1130 ntBASIC5.66□□□□□ -1.5
CXCL12P48061 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.66□□□□□ -1.5
CXCL12P48061 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.66□□□□□ -1.5
CXCL12P48061 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.66□□□□□ -1.5
CXCL12P48061 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CXCL12P48061 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.66□□□□□ -1.5
CXCL12P48061 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CXCL12P48061 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms