Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS23P1-201ENST00000491662 432 ntBASIC7.25□□□□□ -1.25
COL15A1P39059 RN7SL808P-201ENST00000496066 299 ntBASIC7.25□□□□□ -1.25
COL15A1P39059 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.25□□□□□ -1.25
COL15A1P39059 AC087360.1-201ENST00000518788 616 ntBASIC7.25□□□□□ -1.25
COL15A1P39059 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.25□□□□□ -1.25
COL15A1P39059 HMGN2P6-201ENST00000551091 273 ntBASIC7.25□□□□□ -1.25
COL15A1P39059 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.25□□□□□ -1.25
COL15A1P39059 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC7.25□□□□□ -1.25
COL15A1P39059 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.25□□□□□ -1.25
COL15A1P39059 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.25□□□□□ -1.25
COL15A1P39059 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
COL15A1P39059 ZNF812P-201ENST00000457674 1694 ntBASIC7.25□□□□□ -1.25
COL15A1P39059 EPS15P1-202ENST00000459691 2071 ntBASIC7.25□□□□□ -1.25
COL15A1P39059 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL15A1P39059 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.24□□□□□ -1.25
COL15A1P39059 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.24□□□□□ -1.25
COL15A1P39059 U3.2-201ENST00000362981 210 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 MIR130A-201ENST00000385274 89 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL15A1P39059 RNU1-77P-201ENST00000390868 162 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 RN7SKP279-201ENST00000411383 298 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 RPL23AP27-201ENST00000415161 451 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.24□□□□□ -1.25
COL15A1P39059 RPL7L1P9-201ENST00000431298 745 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AC245047.2-201ENST00000441060 530 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.24□□□□□ -1.25
COL15A1P39059 FCF1P7-201ENST00000451185 558 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.24□□□□□ -1.25
COL15A1P39059 AC079841.1-201ENST00000481228 950 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.24□□□□□ -1.25
COL15A1P39059 AC074255.1-201ENST00000511259 501 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AC078878.1-201ENST00000539832 958 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.24□□□□□ -1.25
COL15A1P39059 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.24□□□□□ -1.25
COL15A1P39059 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.24□□□□□ -1.25
COL15A1P39059 AC012616.1-201ENST00000600294 197 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AC012467.1-201ENST00000607740 256 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AL139407.1-201ENST00000613826 1175 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AL118522.2-201ENST00000616045 615 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 AC132068.1-201ENST00000623805 459 ntBASIC7.24□□□□□ -1.25
COL15A1P39059 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
COL15A1P39059 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL15A1P39059 AC068733.2-201ENST00000605434 1418 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.23□□□□□ -1.25
COL15A1P39059 SLC35E1P1-201ENST00000419313 864 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.23□□□□□ -1.25
COL15A1P39059 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.23□□□□□ -1.25
COL15A1P39059 RN7SL51P-201ENST00000468230 285 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 RPL7P39-201ENST00000481157 744 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 MTND3P6-201ENST00000485242 339 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.23□□□□□ -1.25
COL15A1P39059 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC7.23□□□□□ -1.25
COL15A1P39059 PGAM1P13-201ENST00000507497 754 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 AC105384.2-201ENST00000508433 640 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.23□□□□□ -1.25
COL15A1P39059 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.23□□□□□ -1.25
COL15A1P39059 AP003168.1-201ENST00000530091 307 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.23□□□□□ -1.25
COL15A1P39059 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.23□□□□□ -1.25
COL15A1P39059 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.23□□□□□ -1.25
COL15A1P39059 AL049779.2-201ENST00000553847 315 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 OR7A8P-201ENST00000595427 913 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.23□□□□□ -1.25
COL15A1P39059 AC116651.1-201ENST00000609724 556 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 AL162574.2-201ENST00000614618 657 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 AL118508.4-201ENST00000624142 1176 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 ZNF101P1-201ENST00000435701 1720 ntBASIC7.23□□□□□ -1.25
COL15A1P39059 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.23□□□□□ -1.25
COL15A1P39059 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.23□□□□□ -1.25
COL15A1P39059 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL15A1P39059 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL15A1P39059 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
COL15A1P39059 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL15A1P39059 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.22□□□□□ -1.25
COL15A1P39059 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL15A1P39059 MIR585-201ENST00000384887 94 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms