Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SNORA16A-201ENST00000384342 137 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 RPS4XP9-201ENST00000405151 780 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 AC068138.1-201ENST00000412635 217 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN4AP35499 USP9YP9-201ENST00000429406 715 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.66□□□□□ -1.34
SCN4AP35499 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN4AP35499 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN4AP35499 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.66□□□□□ -1.34
SCN4AP35499 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.66□□□□□ -1.34
SCN4AP35499 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SCN4AP35499 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 OLMALINC-203ENST00000641087 3779 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 AC005225.5-201ENST00000623547 2225 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
SCN4AP35499 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
SCN4AP35499 CCDC162P-202ENST00000368966 6751 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN4AP35499 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 CASC19-221ENST00000641309 1382 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN4AP35499 SNORA70.9-201ENST00000384370 135 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 RPS29P33-201ENST00000456717 146 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 TPM3P3-201ENST00000521343 354 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 AC004890.3-201ENST00000605566 1095 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 AC009704.2-201ENST00000618739 483 ntBASIC6.66□□□□□ -1.34
SCN4AP35499 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN4AP35499 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SCN4AP35499 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN4AP35499 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SCN4AP35499 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.65□□□□□ -1.34
SCN4AP35499 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SCN4AP35499 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN4AP35499 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SCN4AP35499 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN4AP35499 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN4AP35499 HMGB1P40-201ENST00000525121 540 ntBASIC6.65□□□□□ -1.34
SCN4AP35499 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN4AP35499 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.65□□□□□ -1.34
SCN4AP35499 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SCN4AP35499 MIR6758-201ENST00000620653 63 ntBASIC6.65□□□□□ -1.34
SCN4AP35499 AP000346.3-201ENST00000622821 210 ntBASIC6.65□□□□□ -1.34
SCN4AP35499 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SCN4AP35499 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
SCN4AP35499 AC107980.1-201ENST00000558671 3355 ntBASIC6.65□□□□□ -1.35
SCN4AP35499 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
SCN4AP35499 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
SCN4AP35499 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 AL034546.1-201ENST00000623740 3693 ntBASIC6.65□□□□□ -1.35
SCN4AP35499 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SCN4AP35499 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SCN4AP35499 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SCN4AP35499 NPM1P40-201ENST00000412758 733 ntBASIC6.64□□□□□ -1.35
SCN4AP35499 C4BPAP2-201ENST00000428434 478 ntBASIC6.64□□□□□ -1.35
SCN4AP35499 AC079922.1-201ENST00000443291 359 ntBASIC6.64□□□□□ -1.35
SCN4AP35499 RPL7P16-201ENST00000479738 738 ntBASIC6.64□□□□□ -1.35
SCN4AP35499 PDCL3P4-201ENST00000489621 720 ntBASIC6.64□□□□□ -1.35
SCN4AP35499 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.64□□□□□ -1.35
SCN4AP35499 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN4AP35499 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.64□□□□□ -1.35
SCN4AP35499 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.64□□□□□ -1.35
SCN4AP35499 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN4AP35499 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.64□□□□□ -1.35
SCN4AP35499 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.64□□□□□ -1.35
SCN4AP35499 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SCN4AP35499 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
SCN4AP35499 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SCN4AP35499 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SCN4AP35499 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SCN4AP35499 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SCN4AP35499 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms