Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXC13P31276 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC13P31276 GEMIN2P1-201ENST00000454246 752 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC13P31276 AC023245.1-201ENST00000468501 517 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 OR11I1P-201ENST00000486033 954 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 AP001804.1-201ENST00000526868 919 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
HOXC13P31276 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 ZNF322P1-201ENST00000568013 1209 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 MTND2P13-201ENST00000577438 1039 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 AC005244.1-201ENST00000582566 339 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC13P31276 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 Z95327.3-201ENST00000610385 572 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC13P31276 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXC13P31276 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXC13P31276 AL355834.1-201ENST00000556602 3965 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXC13P31276 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXC13P31276 RNU1-59P-201ENST00000364829 162 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXC13P31276 RNU6-171P-201ENST00000384354 107 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC13P31276 BX119904.3-201ENST00000428194 957 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 AC104164.1-201ENST00000460282 590 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 RN7SL799P-201ENST00000475891 298 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 AC083795.1-201ENST00000491760 320 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXC13P31276 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXC13P31276 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXC13P31276 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXC13P31276 AP006245.2-201ENST00000522004 300 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC13P31276 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC13P31276 AC012254.3-201ENST00000591183 2117 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 AL136131.3-201ENST00000607600 188 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 U1.25-201ENST00000614085 162 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 U1.31-201ENST00000620022 160 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 OR8G3P-202ENST00000641572 1255 ntBASIC6.18□□□□□ -1.42
HOXC13P31276 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HOXC13P31276 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXC13P31276 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
HOXC13P31276 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC13P31276 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC13P31276 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HOXC13P31276 AC006484.1-201ENST00000435086 1884 ntBASIC6.17□□□□□ -1.42
HOXC13P31276 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 THAP12P9-201ENST00000503971 2360 ntBASIC6.17□□□□□ -1.42
HOXC13P31276 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 AL355377.1-201ENST00000621125 1653 ntBASIC6.17□□□□□ -1.42
HOXC13P31276 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HOXC13P31276 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC13P31276 RNU6-697P-201ENST00000363348 107 ntBASIC6.17□□□□□ -1.42
HOXC13P31276 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms