Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.41□□□□□ -1.54
COL5A1P20908 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.41□□□□□ -1.54
COL5A1P20908 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.41□□□□□ -1.54
COL5A1P20908 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.41□□□□□ -1.54
COL5A1P20908 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.41□□□□□ -1.54
COL5A1P20908 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.41□□□□□ -1.54
COL5A1P20908 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.41□□□□□ -1.54
COL5A1P20908 MIR4646-201ENST00000580775 63 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AL022394.1-201ENST00000606979 292 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AP002799.1-201ENST00000623552 423 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
COL5A1P20908 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 AL034546.1-201ENST00000623740 3693 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 MIR551A-201ENST00000385042 96 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 RPL23AP18-201ENST00000416139 468 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.41□□□□□ -1.54
COL5A1P20908 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.41□□□□□ -1.54
COL5A1P20908 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.41□□□□□ -1.54
COL5A1P20908 AC007686.1-201ENST00000488511 463 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 RPS17P5-201ENST00000498293 408 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 BLZF2P-201ENST00000553776 1130 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 AC069307.1-201ENST00000602820 447 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AC133644.2-201ENST00000608142 540 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AC090527.3-201ENST00000619041 548 ntBASIC5.41□□□□□ -1.54
COL5A1P20908 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
COL5A1P20908 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL5A1P20908 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL5A1P20908 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.4□□□□□ -1.54
COL5A1P20908 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL5A1P20908 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL5A1P20908 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.4□□□□□ -1.54
COL5A1P20908 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL5A1P20908 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL5A1P20908 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
COL5A1P20908 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
COL5A1P20908 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL5A1P20908 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL5A1P20908 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.4□□□□□ -1.54
COL5A1P20908 U3.36-201ENST00000408418 213 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 RN7SKP151-201ENST00000410230 316 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 RPS26P13-201ENST00000419030 330 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 AL133325.1-201ENST00000421090 382 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.4□□□□□ -1.54
COL5A1P20908 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.4□□□□□ -1.54
COL5A1P20908 RN7SL346P-201ENST00000491561 294 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 SNRPCP2-201ENST00000504370 475 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 PRELID3BP5-201ENST00000508612 460 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 AP001922.4-201ENST00000526967 290 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.4□□□□□ -1.54
COL5A1P20908 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL5A1P20908 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.4□□□□□ -1.54
COL5A1P20908 AC091953.3-201ENST00000623220 236 ntBASIC5.4□□□□□ -1.54
COL5A1P20908 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.4□□□□□ -1.54
COL5A1P20908 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL5A1P20908 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
COL5A1P20908 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL5A1P20908 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL5A1P20908 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.4□□□□□ -1.55
COL5A1P20908 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
COL5A1P20908 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
COL5A1P20908 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL5A1P20908 AL662795.2-201ENST00000624252 3706 ntBASIC5.4□□□□□ -1.55
COL5A1P20908 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
COL5A1P20908 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.4□□□□□ -1.55
COL5A1P20908 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COL5A1P20908 MIR765-201ENST00000390226 114 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL5A1P20908 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
COL5A1P20908 RPL23AP17-201ENST00000401064 499 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.39□□□□□ -1.55
COL5A1P20908 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.39□□□□□ -1.55
COL5A1P20908 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 AC105399.1-202ENST00000447303 205 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AC091153.1-201ENST00000466297 402 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AC006463.2-201ENST00000473326 348 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AL121594.2-201ENST00000541658 472 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.39□□□□□ -1.55
COL5A1P20908 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms