Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 MT-RNR2-201ENST00000387347 1559 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGA1P17096 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 AC068870.1-201ENST00000563737 2455 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGA1P17096 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 MIR133B-201ENST00000362210 119 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 RNA5SP339-201ENST00000390987 122 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 RPL11P3-201ENST00000395256 523 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 RPL23AP18-201ENST00000416139 468 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 PRUNEP1-201ENST00000425846 705 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGA1P17096 NANOGP4-201ENST00000427230 913 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGA1P17096 OR52B5P-201ENST00000435337 951 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGA1P17096 AC105399.1-202ENST00000447303 205 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGA1P17096 RN7SL172P-201ENST00000460535 303 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 AC005532.2-201ENST00000467154 373 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGA1P17096 RPL7P39-201ENST00000481157 744 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 AC008410.1-201ENST00000483777 339 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HMGA1P17096 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 HIGD1AP14-201ENST00000507617 282 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGA1P17096 CDC42P3-201ENST00000518493 633 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGA1P17096 PMS2P3-207ENST00000529061 717 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 AL049779.2-201ENST00000553847 315 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGA1P17096 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGA1P17096 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGA1P17096 OR52B5P-202ENST00000641118 1110 ntBASIC5.78□□□□□ -1.48
HMGA1P17096 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGA1P17096 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGA1P17096 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGA1P17096 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
HMGA1P17096 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
HMGA1P17096 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
HMGA1P17096 AC093829.1-201ENST00000506662 1618 ntBASIC5.77□□□□□ -1.48
HMGA1P17096 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HMGA1P17096 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HMGA1P17096 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
HMGA1P17096 AC107980.1-201ENST00000558671 3355 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGA1P17096 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 U3.2-201ENST00000362981 210 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 SNORA58B-201ENST00000364259 136 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 RNU4-64P-201ENST00000410795 131 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AL133325.1-201ENST00000421090 382 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 AC092651.1-201ENST00000426110 312 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGA1P17096 AL139148.1-201ENST00000427122 680 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGA1P17096 TMEM183AP1-205ENST00000432739 290 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AC245047.2-201ENST00000441060 530 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGA1P17096 EEF1B2P5-201ENST00000444820 548 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGA1P17096 AC079841.1-201ENST00000481228 950 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AC072052.1-201ENST00000496556 306 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGA1P17096 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGA1P17096 NPM1P42-201ENST00000560329 862 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGA1P17096 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HMGA1P17096 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 AL021707.7-201ENST00000607991 416 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AC211433.2-201ENST00000608433 387 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 AP003789.1-201ENST00000617737 605 ntBASIC5.77□□□□□ -1.49
HMGA1P17096 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGA1P17096 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGA1P17096 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGA1P17096 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGA1P17096 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGA1P17096 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HMGA1P17096 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HMGA1P17096 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms