Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.19□□□□□ -1.42
VTNP04004 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.19□□□□□ -1.42
VTNP04004 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.19□□□□□ -1.42
VTNP04004 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.19□□□□□ -1.42
VTNP04004 RPL23AP17-201ENST00000401064 499 ntBASIC6.19□□□□□ -1.42
VTNP04004 RNA5SP251-201ENST00000410614 137 ntBASIC6.19□□□□□ -1.42
VTNP04004 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 CRIP1P1-201ENST00000427567 185 ntBASIC6.19□□□□□ -1.42
VTNP04004 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.19□□□□□ -1.42
VTNP04004 MEMO1P4-201ENST00000453590 386 ntBASIC6.19□□□□□ -1.42
VTNP04004 RN7SL51P-201ENST00000468230 285 ntBASIC6.19□□□□□ -1.42
VTNP04004 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 COPS8P2-201ENST00000473228 627 ntBASIC6.19□□□□□ -1.42
VTNP04004 RN7SL799P-201ENST00000475891 298 ntBASIC6.19□□□□□ -1.42
VTNP04004 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.19□□□□□ -1.42
VTNP04004 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 MRPS21P9-201ENST00000571150 257 ntBASIC6.19□□□□□ -1.42
VTNP04004 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.19□□□□□ -1.42
VTNP04004 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.19□□□□□ -1.42
VTNP04004 AC006115.2-201ENST00000596823 202 ntBASIC6.19□□□□□ -1.42
VTNP04004 AC012616.1-201ENST00000600294 197 ntBASIC6.19□□□□□ -1.42
VTNP04004 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.19□□□□□ -1.42
VTNP04004 AL513327.3-201ENST00000602618 469 ntBASIC6.19□□□□□ -1.42
VTNP04004 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.19□□□□□ -1.42
VTNP04004 AL118522.2-201ENST00000616045 615 ntBASIC6.19□□□□□ -1.42
VTNP04004 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.19□□□□□ -1.42
VTNP04004 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
VTNP04004 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VTNP04004 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 AL137141.1-201ENST00000624622 4836 ntBASIC6.18□□□□□ -1.42
VTNP04004 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.18□□□□□ -1.42
VTNP04004 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
VTNP04004 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
VTNP04004 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VTNP04004 GAPDHP24-201ENST00000328713 983 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.18□□□□□ -1.42
VTNP04004 RNU4-2-201ENST00000365668 141 ntBASIC6.18□□□□□ -1.42
VTNP04004 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 AC009804.1-201ENST00000400949 179 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.18□□□□□ -1.42
VTNP04004 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.18□□□□□ -1.42
VTNP04004 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.18□□□□□ -1.42
VTNP04004 VN1R21P-201ENST00000426703 765 ntBASIC6.18□□□□□ -1.42
VTNP04004 OR6D1P-201ENST00000436165 939 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.18□□□□□ -1.42
VTNP04004 AL163193.1-201ENST00000444895 788 ntBASIC6.18□□□□□ -1.42
VTNP04004 MYO5BP2-201ENST00000449815 1277 ntBASIC6.18□□□□□ -1.42
VTNP04004 AL606490.1-201ENST00000452266 765 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.18□□□□□ -1.42
VTNP04004 RN7SL515P-201ENST00000463999 297 ntBASIC6.18□□□□□ -1.42
VTNP04004 RN7SL583P-201ENST00000475692 287 ntBASIC6.18□□□□□ -1.42
VTNP04004 RPS4XP1-201ENST00000482189 787 ntBASIC6.18□□□□□ -1.42
VTNP04004 RPS7P6-201ENST00000485777 579 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC021146.10-201ENST00000515628 706 ntBASIC6.18□□□□□ -1.42
VTNP04004 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC022616.2-201ENST00000523185 300 ntBASIC6.18□□□□□ -1.42
VTNP04004 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.18□□□□□ -1.42
VTNP04004 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 MIR4311-201ENST00000580794 100 ntBASIC6.18□□□□□ -1.42
VTNP04004 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 AC025574.2-201ENST00000615621 514 ntBASIC6.18□□□□□ -1.42
VTNP04004 AC136428.4-201ENST00000634254 1155 ntBASIC6.18□□□□□ -1.42
VTNP04004 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VTNP04004 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.18□□□□□ -1.42
VTNP04004 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VTNP04004 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VTNP04004 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VTNP04004 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VTNP04004 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms