Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 CXCR2P1-202ENST00000443392 1074 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.66□□□□□ -1.5
SHOX2O60902 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.66□□□□□ -1.5
SHOX2O60902 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.66□□□□□ -1.5
SHOX2O60902 AC144530.1-201ENST00000452862 555 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 RN7SL39P-201ENST00000462264 297 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 RN7SL267P-201ENST00000485107 261 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.66□□□□□ -1.5
SHOX2O60902 AC008629.2-201ENST00000503783 483 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHOX2O60902 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.66□□□□□ -1.5
SHOX2O60902 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.66□□□□□ -1.5
SHOX2O60902 AC233702.9-201ENST00000581528 203 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 RN7SL435P-201ENST00000584418 282 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHOX2O60902 AL645933.2-201ENST00000606743 1207 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.66□□□□□ -1.5
SHOX2O60902 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.66□□□□□ -1.5
SHOX2O60902 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHOX2O60902 TET1P1-201ENST00000426627 2301 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHOX2O60902 AC004817.4-201ENST00000602396 3625 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 AC019072.1-201ENST00000604535 1551 ntBASIC5.66□□□□□ -1.5
SHOX2O60902 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SHOX2O60902 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHOX2O60902 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SHOX2O60902 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
SHOX2O60902 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.66□□□□□ -1.5
SHOX2O60902 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SHOX2O60902 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 AC006600.2-201ENST00000624834 2506 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.65□□□□□ -1.5
SHOX2O60902 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.65□□□□□ -1.5
SHOX2O60902 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 RPL11P4-201ENST00000332269 436 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 RN7SKP15-201ENST00000364742 309 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.65□□□□□ -1.5
SHOX2O60902 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SHOX2O60902 RNA5SP156-201ENST00000410250 110 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 RPS7P8-201ENST00000418311 581 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 THEM7P-201ENST00000419556 672 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.65□□□□□ -1.5
SHOX2O60902 GAPDHP19-201ENST00000431768 1005 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.65□□□□□ -1.5
SHOX2O60902 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 AC094019.1-201ENST00000434678 472 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 NANOGP9-201ENST00000439890 892 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 NPM1P23-201ENST00000440193 849 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AL136455.1-201ENST00000441083 1240 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 NPM1P9-201ENST00000453156 844 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC090638.1-201ENST00000498296 909 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 IGBP1P4-201ENST00000503202 879 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.65□□□□□ -1.5
SHOX2O60902 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.65□□□□□ -1.5
SHOX2O60902 AC135983.3-201ENST00000528049 1226 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 OR5AM1P-201ENST00000532136 1032 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 AC037479.1-201ENST00000558361 625 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AL589765.6-201ENST00000601909 549 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC005229.3-201ENST00000603438 323 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC145423.1-201ENST00000605712 336 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.65□□□□□ -1.5
SHOX2O60902 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHOX2O60902 MIR6778-201ENST00000617912 73 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC068213.1-201ENST00000625124 226 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 CLUHP10-201ENST00000631979 980 ntBASIC5.65□□□□□ -1.5
SHOX2O60902 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.65□□□□□ -1.5
SHOX2O60902 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.65□□□□□ -1.5
SHOX2O60902 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.65□□□□□ -1.51
SHOX2O60902 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHOX2O60902 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHOX2O60902 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.65□□□□□ -1.51
SHOX2O60902 AC007842.1-201ENST00000597336 2039 ntBASIC5.65□□□□□ -1.51
SHOX2O60902 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SHOX2O60902 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHOX2O60902 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHOX2O60902 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHOX2O60902 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.64□□□□□ -1.51
SHOX2O60902 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHOX2O60902 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHOX2O60902 AL450345.1-202ENST00000605741 3881 ntBASIC5.64□□□□□ -1.51
SHOX2O60902 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHOX2O60902 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.64□□□□□ -1.51
SHOX2O60902 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SHOX2O60902 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SHOX2O60902 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHOX2O60902 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHOX2O60902 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHOX2O60902 MIR1282-201ENST00000408865 101 ntBASIC5.64□□□□□ -1.51
SHOX2O60902 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.64□□□□□ -1.51
SHOX2O60902 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms