Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC092653.1-201ENST00000608509 531 ntBASIC9.68□□□□□ -0.86
CUX2O14529 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CUX2O14529 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC9.68□□□□□ -0.86
CUX2O14529 IMMTP1-201ENST00000435590 2219 ntBASIC9.68□□□□□ -0.86
CUX2O14529 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CUX2O14529 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CUX2O14529 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.68□□□□□ -0.86
CUX2O14529 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CUX2O14529 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
CUX2O14529 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CUX2O14529 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CUX2O14529 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CUX2O14529 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.68□□□□□ -0.86
CUX2O14529 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CUX2O14529 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
CUX2O14529 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CUX2O14529 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.67□□□□□ -0.86
CUX2O14529 OR13K1P-201ENST00000444577 975 ntBASIC9.67□□□□□ -0.86
CUX2O14529 IGKV2-23-201ENST00000518729 323 ntBASIC9.67□□□□□ -0.86
CUX2O14529 AC078878.1-201ENST00000539832 958 ntBASIC9.67□□□□□ -0.86
CUX2O14529 AC007494.1-201ENST00000562293 760 ntBASIC9.67□□□□□ -0.86
CUX2O14529 RBM22P1-201ENST00000578589 1214 ntBASIC9.67□□□□□ -0.86
CUX2O14529 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.67□□□□□ -0.86
CUX2O14529 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
CUX2O14529 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC9.67□□□□□ -0.86
CUX2O14529 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CUX2O14529 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.67□□□□□ -0.86
CUX2O14529 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CUX2O14529 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.67□□□□□ -0.86
CUX2O14529 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC9.67□□□□□ -0.86
CUX2O14529 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.67□□□□□ -0.86
CUX2O14529 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.67□□□□□ -0.86
CUX2O14529 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CUX2O14529 AL353626.3-201ENST00000413399 657 ntBASIC9.66□□□□□ -0.86
CUX2O14529 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CUX2O14529 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC9.66□□□□□ -0.86
CUX2O14529 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.66□□□□□ -0.86
CUX2O14529 RNU6-941P-201ENST00000516346 108 ntBASIC9.66□□□□□ -0.86
CUX2O14529 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
CUX2O14529 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.66□□□□□ -0.86
CUX2O14529 BNIP3P11-201ENST00000603878 563 ntBASIC9.66□□□□□ -0.86
CUX2O14529 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
CUX2O14529 MAPK10-371ENST00000641952 5209 ntBASIC9.66□□□□□ -0.86
CUX2O14529 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CUX2O14529 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.66□□□□□ -0.86
CUX2O14529 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
CUX2O14529 AP003175.1-201ENST00000641383 6658 ntBASIC9.66□□□□□ -0.86
CUX2O14529 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CUX2O14529 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
CUX2O14529 AC005618.1-201ENST00000606901 3148 ntBASIC9.66□□□□□ -0.86
CUX2O14529 AL008638.3-201ENST00000623027 5182 ntBASIC9.66□□□□□ -0.86
CUX2O14529 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CUX2O14529 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CUX2O14529 FAM3C2-201ENST00000312214 681 ntBASIC9.66□□□□□ -0.86
CUX2O14529 AL078599.1-201ENST00000402075 293 ntBASIC9.66□□□□□ -0.86
CUX2O14529 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC9.66□□□□□ -0.86
CUX2O14529 CDC27P1-201ENST00000445384 715 ntBASIC9.66□□□□□ -0.86
CUX2O14529 RN7SL165P-201ENST00000477476 291 ntBASIC9.66□□□□□ -0.86
CUX2O14529 AC021483.2-201ENST00000567415 758 ntBASIC9.66□□□□□ -0.86
CUX2O14529 AL162431.4-201ENST00000604674 411 ntBASIC9.66□□□□□ -0.86
CUX2O14529 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.66□□□□□ -0.86
CUX2O14529 TCL6_3.1-201ENST00000619064 137 ntBASIC9.66□□□□□ -0.86
CUX2O14529 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC9.65□□□□□ -0.86
CUX2O14529 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.65□□□□□ -0.86
CUX2O14529 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
CUX2O14529 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
CUX2O14529 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.65□□□□□ -0.86
CUX2O14529 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CUX2O14529 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CUX2O14529 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CUX2O14529 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC9.65□□□□□ -0.87
CUX2O14529 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.65□□□□□ -0.87
CUX2O14529 RPL23AP72-201ENST00000492447 435 ntBASIC9.65□□□□□ -0.87
CUX2O14529 OR7H2P-201ENST00000513483 306 ntBASIC9.65□□□□□ -0.87
CUX2O14529 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
CUX2O14529 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.65□□□□□ -0.87
CUX2O14529 AC137695.1-201ENST00000604126 489 ntBASIC9.65□□□□□ -0.87
CUX2O14529 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC9.65□□□□□ -0.87
CUX2O14529 AC067931.1-201ENST00000624190 671 ntBASIC9.65□□□□□ -0.87
CUX2O14529 AC013268.3-201ENST00000262716 2324 ntBASIC9.65□□□□□ -0.87
CUX2O14529 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.65□□□□□ -0.87
CUX2O14529 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
CUX2O14529 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.64□□□□□ -0.87
CUX2O14529 AC132825.1-201ENST00000463573 2247 ntBASIC9.64□□□□□ -0.87
CUX2O14529 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.64□□□□□ -0.87
CUX2O14529 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
CUX2O14529 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
CUX2O14529 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.64□□□□□ -0.87
CUX2O14529 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CUX2O14529 CCDC162P-202ENST00000368966 6751 ntBASIC9.64□□□□□ -0.87
CUX2O14529 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CUX2O14529 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CUX2O14529 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CUX2O14529 LINC01616-201ENST00000561816 2280 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms